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Keywords
Last Name
Institution

Martin Leon Yarmush, M.D., PH.D.

TitleLecturer on Surgery
InstitutionMassachusetts General Hospital
DepartmentSurgery
AddressMassachusetts General Hospital
Bigelow 1401
55 Fruit St
Boston MA 02114
Phone617/726-3474
Fax617/573-9471
Other Positions
TitleMember of the Faculty of the Harvard-MIT Division of Health Sciences and Technology
InstitutionMassachusetts Institute of Technology
DepartmentHealth Sciences and Technology


 Bibliographic 
 selected publications
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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  1. Konry T, Golberg A, Yarmush M. Live single cell functional phenotyping in droplet nano-liter reactors. Sci Rep. 2013; 3:3179.
    View in: PubMed
  2. Liu Q, Berendsen T, Izamis ML, Uygun B, Yarmush ML, Uygun K. Perfusion defatting at subnormothermic temperatures in steatotic rat livers. Transplant Proc. 2013 Nov; 45(9):3209-13.
    View in: PubMed
  3. Bruinsma BG, Berendsen TA, Izamis ML, Yarmush ML, Uygun K. Determination and extension of the limits to static cold storage using subnormothermic machine perfusion. Int J Artif Organs. 2013 Dec 12; 36(11):775-80.
    View in: PubMed
  4. Liu Q, Izamis ML, Xu H, Berendsen T, Yarmush M, Uygun K. Strategies to rescue steatotic livers before transplantation in clinical and experimental studies. World J Gastroenterol. 2013 Aug 7; 19(29):4638-50.
    View in: PubMed
  5. Saeidi N, Meoli L, Nestoridi E, Gupta NK, Kvas S, Kucharczyk J, Bonab AA, Fischman AJ, Yarmush ML, Stylopoulos N. Reprogramming of intestinal glucose metabolism and glycemic control in rats after gastric bypass. Science. 2013 Jul 26; 341(6144):406-10.
    View in: PubMed
  6. Izamis ML, Tolboom H, Uygun B, Berthiaume F, Yarmush ML, Uygun K. Resuscitation of ischemic donor livers with normothermic machine perfusion: a metabolic flux analysis of treatment in rats. PLoS One. 2013; 8(7):e69758.
    View in: PubMed
  7. Nativ NI, Yarmush G, Chen A, Dong D, Henry SD, Guarrera JV, Klein KM, Maguire T, Schloss R, Berthiaume F, Yarmush ML. Rat hepatocyte culture model of macrosteatosis: Effect of macrosteatosis induction and reversal on viability and liver-specific function. J Hepatol. 2013 Dec; 59(6):1307-14.
    View in: PubMed
  8. Usta OB, Kim Y, Ozer S, Bruinsma BG, Lee J, Demir E, Berendsen TA, Puts CF, Izamis ML, Uygun K, Uygun BE, Yarmush ML. Supercooling as a viable non-freezing cell preservation method of rat hepatocytes. PLoS One. 2013; 8(7):e69334.
    View in: PubMed
  9. Uygun BE, Yarmush ML. Engineered liver for transplantation. Curr Opin Biotechnol. 2013 Oct; 24(5):893-9.
    View in: PubMed
  10. Bohr S, Patel SJ, Vasko R, Shen K, Huang G, Yarmush ML, Berthiaume F. Highly upregulated lhx2 in the foxn1(-/-) nude mouse phenotype reflects a dysregulated and expanded epidermal stem cell niche. PLoS One. 2013; 8(5):e64223.
    View in: PubMed
  11. Kang L, Voskinarian-Berse V, Law E, Reddin T, Bhatia M, Hariri A, Ning Y, Dong D, Maguire T, Yarmush M, Hofgartner W, Abbot S, Zhang X, Hariri R. Characterization and ex vivo Expansion of Human Placenta-Derived Natural Killer Cells for Cancer Immunotherapy. Front Immunol. 2013; 4:101.
    View in: PubMed
  12. Zhu B, Smith J, Yarmush ML, Nahmias Y, Kirby BJ, Murthy SK. Microfluidic enrichment of mouse epidermal stem cells and validation of stem cell proliferation in vitro. Tissue Eng Part C Methods. 2013 Oct; 19(10):765-73.
    View in: PubMed
  13. Golberg A, Bei M, Sheridan RL, Yarmush ML. Regeneration and control of human fibroblast cell density by intermittently delivered pulsed electric fields. Biotechnol Bioeng. 2013 Jun; 110(6):1759-68.
    View in: PubMed
  14. Bohr S, Patel SJ, Shen K, Vitalo AG, Brines M, Cerami A, Berthiaume F, Yarmush ML. Alternative erythropoietin-mediated signaling prevents secondary microvascular thrombosis and inflammation within cutaneous burns. Proc Natl Acad Sci U S A. 2013 Feb 26; 110(9):3513-8.
    View in: PubMed
  15. Golberg A, Yarmush ML. Nonthermal irreversible electroporation: fundamentals, applications, and challenges. IEEE Trans Biomed Eng. 2013 Mar; 60(3):707-14.
    View in: PubMed
  16. Dollé JP, Morrison Iii B, Schloss RS, Yarmush ML. An organotypic uniaxial strain model using microfluidics. Lab Chip. 2013 Jan 2; 13(3):432-42.
    View in: PubMed
  17. Milwid JM, Ichimura T, Li M, Jiao Y, Lee J, Yarmush JS, Parekkadan B, Tilles AW, Bonventre JV, Yarmush ML. Secreted factors from bone marrow stromal cells upregulate IL-10 and reverse acute kidney injury. Stem Cells Int. 2012; 2012:392050.
    View in: PubMed
  18. Lee J, Li M, Milwid J, Dunham J, Vinegoni C, Gorbatov R, Iwamoto Y, Wang F, Shen K, Hatfield K, Enger M, Shafiee S, McCormack E, Ebert BL, Weissleder R, Yarmush ML, Parekkadan B. Implantable microenvironments to attract hematopoietic stem/cancer cells. Proc Natl Acad Sci U S A. 2012 Nov 27; 109(48):19638-43.
    View in: PubMed
  19. Bohr S, Patel SJ, Sarin D, Irimia D, Yarmush ML, Berthiaume F. Resolvin D2 prevents secondary thrombosis and necrosis in a mouse burn wound model. Wound Repair Regen. 2013 Jan; 21(1):35-43.
    View in: PubMed
  20. Nativ NI, Maguire TJ, Yarmush G, Brasaemle DL, Henry SD, Guarrera JV, Berthiaume F, Yarmush ML. Liver defatting: an alternative approach to enable steatotic liver transplantation. Am J Transplant. 2012 Dec; 12(12):3176-83.
    View in: PubMed
  21. Saeidi N, Nestoridi E, Kucharczyk J, Uygun MK, Yarmush ML, Stylopoulos N. Sleeve gastrectomy and Roux-en-Y gastric bypass exhibit differential effects on food preferences, nutrient absorption and energy expenditure in obese rats. Int J Obes (Lond). 2012 Nov; 36(11):1396-402.
    View in: PubMed
  22. Uygun BE, Yarmush ML, Uygun K. Application of whole-organ tissue engineering in hepatology. Nat Rev Gastroenterol Hepatol. 2012 Dec; 9(12):738-44.
    View in: PubMed
  23. Bonab AA, Fricchione JG, Gorantla S, Vitalo AG, Auster ME, Levine SJ, Scichilone JM, Hegde M, Foote W, Fricchione GL, Denninger JW, Yarmush DM, Fischman AJ, Yarmush ML, Levine JB. Isolation rearing significantly perturbs brain metabolism in the thalamus and hippocampus. Neuroscience. 2012 Oct 25; 223:457-64.
    View in: PubMed
  24. Chen A, Yarmush ML, Maguire T. Physiologically based pharmacokinetic models: integration of in silico approaches with micro cell culture analogues. Curr Drug Metab. 2012 Jul; 13(6):863-80.
    View in: PubMed
  25. Perk S, Izamis ML, Tolboom H, Uygun B, Yarmush ML, Uygun K. A fitness index for transplantation of machine-perfused cadaveric rat livers. BMC Res Notes. 2012; 5:325.
    View in: PubMed
  26. Berendsen TA, Bruinsma BG, Lee J, D'Andrea V, Liu Q, Izamis ML, Uygun K, Yarmush ML. A simplified subnormothermic machine perfusion system restores ischemically damaged liver grafts in a rat model of orthotopic liver transplantation. Transplant Res. 2012; 1(1):6.
    View in: PubMed
  27. Gao S, Seker E, Casali M, Wang F, Bale SS, Price GM, Yarmush ML. Ex vivo gene delivery to hepatocytes: techniques, challenges, and underlying mechanisms. Ann Biomed Eng. 2012 Sep; 40(9):1851-61.
    View in: PubMed
  28. Seker E, Berdichevsky Y, Staley KJ, Yarmush ML. Microfabrication-compatible nanoporous gold foams as biomaterials for drug delivery. Adv Healthc Mater. 2012 Mar; 1(2):172-6.
    View in: PubMed
  29. Patel SJ, Milwid JM, King KR, Bohr S, Iracheta-Velle A, Li M, Vitalo A, Parekkadan B, Jindal R, Yarmush ML. Gap junction inhibition prevents drug-induced liver toxicity and fulminant hepatic failure. Nat Biotechnol. 2012 Feb; 30(2):179-83.
    View in: PubMed
  30. Perk S, Izamis ML, Tolboom H, Uygun B, Berthiaume F, Yarmush ML, Uygun K. A metabolic index of ischemic injury for perfusion-recovery of cadaveric rat livers. PLoS One. 2011; 6(12):e28518.
    View in: PubMed
  31. Chakraborty N, Menze MA, Elmoazzen H, Vu H, Yarmush ML, Hand SC, Toner M. Trehalose transporter from African chironomid larvae improves desiccation tolerance of Chinese hamster ovary cells. Cryobiology. 2012 Apr; 64(2):91-6.
    View in: PubMed
  32. Avila-Elchiver M, Nagrath D, Yarmush ML. Optimality and thermodynamics determine the evolution of transcriptional regulatory networks. Mol Biosyst. 2012 Feb; 8(2):511-30.
    View in: PubMed
  33. Seker E, Sung JH, Shuler ML, Yarmush ML. Solving medical problems with BioMEMS. IEEE Pulse. 2011 Nov; 2(6):51-9.
    View in: PubMed
  34. Xu H, Berendsen T, Kim K, Soto-Gutiérrez A, Bertheium F, Yarmush ML, Hertl M. Excorporeal normothermic machine perfusion resuscitates pig DCD livers with extended warm ischemia. J Surg Res. 2012 Apr; 173(2):e83-8.
    View in: PubMed
  35. Lu Y, Zhang G, Shen C, Uygun K, Yarmush ML, Meng Q. A novel 3D liver organoid system for elucidation of hepatic glucose metabolism. Biotechnol Bioeng. 2012 Feb; 109(2):595-604.
    View in: PubMed
  36. Vitalo AG, Gorantla S, Fricchione JG, Scichilone JM, Camacho J, Niemi SM, Denninger JW, Benson H, Yarmush ML, Levine JB. Environmental enrichment with nesting material accelerates wound healing in isolation-reared rats. Behav Brain Res. 2012 Jan 15; 226(2):606-12.
    View in: PubMed
  37. Parekkadan B, Fletcher AL, Li M, Tjota MY, Bellemare-Pelletier A, Milwid JM, Lee JW, Yarmush ML, Turley SJ. Aire controls mesenchymal stem cell-mediated suppression in chronic colitis. Mol Ther. 2012 Jan; 20(1):178-86.
    View in: PubMed
  38. Ono S, Obara H, Takayanagi A, Tanabe M, Kawachi S, Itano O, Shinoda M, Kitago M, Hibi T, Chiba T, Du W, Matsumoto K, Tilles AW, Yarmush ML, Aiso S, Shimizu N, Sakamoto M, Kitagawa Y. Suppressive effects of interleukin-18 on liver function in rat liver allografts. J Surg Res. 2012 Jul; 176(1):293-300.
    View in: PubMed
  39. Morrison B, Elkin BS, Dollé JP, Yarmush ML. In vitro models of traumatic brain injury. Annu Rev Biomed Eng. 2011 Aug 15; 13:91-126.
    View in: PubMed
  40. Li M, Tilles AW, Milwid JM, Hammad M, Lee J, Yarmush ML, Parekkadan B. Phenotypic and functional characterization of human bone marrow stromal cells in hollow-fibre bioreactors. J Tissue Eng Regen Med. 2012 May; 6(5):369-77.
    View in: PubMed
  41. Barminko J, Kim JH, Otsuka S, Gray A, Schloss R, Grumet M, Yarmush ML. Encapsulated mesenchymal stromal cells for in vivo transplantation. Biotechnol Bioeng. 2011 Nov; 108(11):2747-58.
    View in: PubMed
  42. Berendsen TA, Izamis ML, Xu H, Liu Q, Hertl M, Berthiaume F, Yarmush ML, Uygun K. Hepatocyte viability and adenosine triphosphate content decrease linearly over time during conventional cold storage of rat liver grafts. Transplant Proc. 2011 Jun; 43(5):1484-8.
    View in: PubMed
  43. Patel SJ, Jindal R, King KR, Tilles AW, Yarmush ML. The inflammatory response to double stranded DNA in endothelial cells is mediated by NF?B and TNFa. PLoS One. 2011; 6(5):e19910.
    View in: PubMed
  44. Sharma NS, Nagrath D, Yarmush ML. Metabolic profiling based quantitative evaluation of hepatocellular metabolism in presence of adipocyte derived extracellular matrix. PLoS One. 2011; 6(5):e20137.
    View in: PubMed
  45. Bieganski RM, Yarmush ML. Novel ligands that target the mitochondrial membrane protein mitoNEET. J Mol Graph Model. 2011 Jun; 29(7):965-73.
    View in: PubMed
  46. Li L, Davidovich AE, Schloss JM, Chippada U, Schloss RR, Langrana NA, Yarmush ML. Neural lineage differentiation of embryonic stem cells within alginate microbeads. Biomaterials. 2011 Jul; 32(20):4489-97.
    View in: PubMed
  47. Shulman M, Cohen M, Soto-Gutierrez A, Yagi H, Wang H, Goldwasser J, Lee-Parsons CW, Benny-Ratsaby O, Yarmush ML, Nahmias Y. Enhancement of naringenin bioavailability by complexation with hydroxypropoyl-ß-cyclodextrin. PLoS One. 2011; 6(4):e18033.
    View in: PubMed
  48. Tolboom H, Izamis ML, Sharma N, Milwid JM, Uygun B, Berthiaume F, Uygun K, Yarmush ML. Subnormothermic machine perfusion at both 20°C and 30°C recovers ischemic rat livers for successful transplantation. J Surg Res. 2012 Jun 1; 175(1):149-56.
    View in: PubMed
  49. Goldwasser J, Cohen PY, Lin W, Kitsberg D, Balaguer P, Polyak SJ, Chung RT, Yarmush ML, Nahmias Y. Naringenin inhibits the assembly and long-term production of infectious hepatitis C virus particles through a PPAR-mediated mechanism. J Hepatol. 2011 Nov; 55(5):963-71.
    View in: PubMed
  50. Uygun BE, Price G, Saedi N, Izamis ML, Berendsen T, Yarmush M, Uygun K. Decellularization and recellularization of whole livers. J Vis Exp. 2011; (48).
    View in: PubMed
  51. Berthiaume F, Maguire TJ, Yarmush ML. Tissue engineering and regenerative medicine: history, progress, and challenges. Annu Rev Chem Biomol Eng. 2011; 2:403-30.
    View in: PubMed
  52. Jiao J, Milwid JM, Yarmush ML, Parekkadan B. A mesenchymal stem cell potency assay. Methods Mol Biol. 2011; 677:221-31.
    View in: PubMed
  53. Koria P, Yagi H, Kitagawa Y, Megeed Z, Nahmias Y, Sheridan R, Yarmush ML. Self-assembling elastin-like peptides growth factor chimeric nanoparticles for the treatment of chronic wounds. Proc Natl Acad Sci U S A. 2011 Jan 18; 108(3):1034-9.
    View in: PubMed
  54. Konry T, Smolina I, Yarmush JM, Irimia D, Yarmush ML. Ultrasensitive detection of low-abundance surface-marker protein using isothermal rolling circle amplification in a microfluidic nanoliter platform. Small. 2011 Feb 7; 7(3):395-400.
    View in: PubMed
  55. Izamis ML, Sharma NS, Uygun B, Bieganski R, Saeidi N, Nahmias Y, Uygun K, Yarmush ML, Berthiaume F. In situ metabolic flux analysis to quantify the liver metabolic response to experimental burn injury. Biotechnol Bioeng. 2011 Apr; 108(4):839-52.
    View in: PubMed
  56. Orman MA, Arai K, Yarmush ML, Androulakis IP, Berthiaume F, Ierapetritou MG. Metabolic flux determination in perfused livers by mass balance analysis: effect of fasting. Biotechnol Bioeng. 2010 Dec 1; 107(5):825-35.
    View in: PubMed
  57. Wallenstein EJ, Barminko J, Schloss RS, Yarmush ML. Serum starvation improves transient transfection efficiency in differentiating embryonic stem cells. Biotechnol Prog. 2010 Nov-Dec; 26(6):1714-23.
    View in: PubMed
  58. Parekkadan B, Upadhyay R, Dunham J, Iwamoto Y, Mizoguchi E, Mizoguchi A, Weissleder R, Yarmush ML. Bone marrow stromal cell transplants prevent experimental enterocolitis and require host CD11b+ splenocytes. Gastroenterology. 2011 Mar; 140(3):966-75.
    View in: PubMed
  59. Konry T, Dominguez-Villar M, Baecher-Allan C, Hafler DA, Yarmush ML. Droplet-based microfluidic platforms for single T cell secretion analysis of IL-10 cytokine. Biosens Bioelectron. 2011 Jan 15; 26(5):2707-10.
    View in: PubMed
  60. Uygun K, Tolboom H, Izamis ML, Uygun B, Sharma N, Yagi H, Soto-Gutierrez A, Hertl M, Berthiaume F, Yarmush ML. Diluted blood reperfusion as a model for transplantation of ischemic rat livers: alanine aminotransferase is a direct indicator of viability. Transplant Proc. 2010 Sep; 42(7):2463-7.
    View in: PubMed
  61. Goldwasser J, Cohen PY, Yang E, Balaguer P, Yarmush ML, Nahmias Y. Transcriptional regulation of human and rat hepatic lipid metabolism by the grapefruit flavonoid naringenin: role of PPARalpha, PPARgamma and LXRalpha. PLoS One. 2010; 5(8):e12399.
    View in: PubMed
  62. Banerjee I, Sharma N, Yarmush M. Impact of co-culture on pancreatic differentiation of embryonic stem cells. J Tissue Eng Regen Med. 2011 Apr; 5(4):313-23.
    View in: PubMed
  63. Yagi H, Soto-Gutierrez A, Navarro-Alvarez N, Nahmias Y, Goldwasser Y, Kitagawa Y, Tilles AW, Tompkins RG, Parekkadan B, Yarmush ML. Reactive bone marrow stromal cells attenuate systemic inflammation via sTNFR1. Mol Ther. 2010 Oct; 18(10):1857-64.
    View in: PubMed
  64. Soto-Gutierrez A, Navarro-Alvarez N, Yagi H, Nahmias Y, Yarmush ML, Kobayashi N. Engineering of an hepatic organoid to develop liver assist devices. Cell Transplant. 2010; 19(6):815-22.
    View in: PubMed
  65. Yagi H, Soto-Gutierrez A, Kitagawa Y, Tilles AW, Tompkins RG, Yarmush ML. Bone marrow mesenchymal stromal cells attenuate organ injury induced by LPS and burn. Cell Transplant. 2010; 19(6):823-30.
    View in: PubMed
  66. van Poll D, Nahmias Y, Soto-Gutierrez A, Ghasemi M, Yagi H, Kobayashi N, Yarmush ML, Hertl M. Human immune reactivity against liver sinusoidal endothelial cells from GalTa(1,3)GalT-deficient pigs. Cell Transplant. 2010; 19(6):783-9.
    View in: PubMed
  67. Uygun BE, Soto-Gutierrez A, Yagi H, Izamis ML, Guzzardi MA, Shulman C, Milwid J, Kobayashi N, Tilles A, Berthiaume F, Hertl M, Nahmias Y, Yarmush ML, Uygun K. Organ reengineering through development of a transplantable recellularized liver graft using decellularized liver matrix. Nat Med. 2010 Jul; 16(7):814-20.
    View in: PubMed
  68. Soto-Gutierrez A, Yagi H, Uygun BE, Navarro-Alvarez N, Uygun K, Kobayashi N, Yang YG, Yarmush ML. Cell delivery: from cell transplantation to organ engineering. Cell Transplant. 2010; 19(6):655-65.
    View in: PubMed
  69. Yagi H, Soto-Gutierrez A, Parekkadan B, Kitagawa Y, Tompkins RG, Kobayashi N, Yarmush ML. Mesenchymal stem cells: Mechanisms of immunomodulation and homing. Cell Transplant. 2010; 19(6):667-79.
    View in: PubMed
  70. Nagrath D, Avila-Elchiver M, Berthiaume F, Tilles AW, Messac A, Yarmush ML. Soft constraints-based multiobjective framework for flux balance analysis. Metab Eng. 2010 Sep; 12(5):429-45.
    View in: PubMed
  71. Banerjee I, Maiti S, Parashurama N, Yarmush M. An integer programming formulation to identify the sparse network architecture governing differentiation of embryonic stem cells. Bioinformatics. 2010 May 15; 26(10):1332-9.
    View in: PubMed
  72. Barua S, Linton RS, Gamboa J, Banerjee I, Yarmush ML, Rege K. Lytic peptide-mediated sensitization of TRAIL-resistant prostate cancer cells to death receptor agonists. Cancer Lett. 2010 Jul 28; 293(2):240-53.
    View in: PubMed
  73. Sharma NS, Nagrath D, Yarmush ML. Adipocyte-derived basement membrane extract with biological activity: applications in hepatocyte functional augmentation in vitro. FASEB J. 2010 Jul; 24(7):2364-74.
    View in: PubMed
  74. Seker E, Berdichevsky Y, Begley MR, Reed ML, Staley KJ, Yarmush ML. The fabrication of low-impedance nanoporous gold multiple-electrode arrays for neural electrophysiology studies. Nanotechnology. 2010 Mar 26; 21(12):125504.
    View in: PubMed
  75. Berdichevsky Y, Staley KJ, Yarmush ML. Building and manipulating neural pathways with microfluidics. Lab Chip. 2010 Apr 21; 10(8):999-1004.
    View in: PubMed
  76. Cho CH, Park J, Tilles AW, Berthiaume F, Toner M, Yarmush ML. Layered patterning of hepatocytes in co-culture systems using microfabricated stencils. Biotechniques. 2010 Jan; 48(1):47-52.
    View in: PubMed
  77. Soto-Gutierrez A, Navarro-Alvarez N, Yagi H, Yarmush ML. Stem cells for liver repopulation. Curr Opin Organ Transplant. 2009 Dec; 14(6):667-73.
    View in: PubMed
  78. Maguire TJ, Novik E, Chao P, Barminko J, Nahmias Y, Yarmush ML, Cheng KC. Design and application of microfluidic systems for in vitro pharmacokinetic evaluation of drug candidates. Curr Drug Metab. 2009 Dec; 10(10):1192-9.
    View in: PubMed
  79. Novik E, Maguire TJ, Chao P, Cheng KC, Yarmush ML. A microfluidic hepatic coculture platform for cell-based drug metabolism studies. Biochem Pharmacol. 2010 Apr 1; 79(7):1036-44.
    View in: PubMed
  80. Izamis ML, Uygun K, Uygun B, Yarmush ML, Berthiaume F. Effects of burn injury on markers of hypermetabolism in rats. J Burn Care Res. 2009 Nov-Dec; 30(6):993-1001.
    View in: PubMed
  81. Roach KL, King KR, Uygun BE, Kohane IS, Yarmush ML, Toner M. High throughput single cell bioinformatics. Biotechnol Prog. 2009 Nov-Dec; 25(6):1772-9.
    View in: PubMed
  82. Yagi H, Parekkadan B, Suganuma K, Soto-Gutierrez A, Tompkins RG, Tilles AW, Yarmush ML. Long-term superior performance of a stem cell/hepatocyte device for the treatment of acute liver failure. Tissue Eng Part A. 2009 Nov; 15(11):3377-88.
    View in: PubMed
  83. Kidambi S, Yarmush RS, Novik E, Chao P, Yarmush ML, Nahmias Y. Oxygen-mediated enhancement of primary hepatocyte metabolism, functional polarization, gene expression, and drug clearance. Proc Natl Acad Sci U S A. 2009 Sep 15; 106(37):15714-9.
    View in: PubMed
  84. Patel SJ, King KR, Casali M, Yarmush ML. DNA-triggered innate immune responses are propagated by gap junction communication. Proc Natl Acad Sci U S A. 2009 Aug 4; 106(31):12867-72.
    View in: PubMed
  85. Wang S, Chen PC, Berthiaume F, Toner M, Jayaraman A, Yarmush ML. Dynamic effect of heat shock pretreatment on apoptotic responses to TNF-alpha in liver cells. J Biomech Eng. 2009 Jul; 131(7):071003.
    View in: PubMed
  86. Nagrath D, Xu H, Tanimura Y, Zuo R, Berthiaume F, Avila M, Yarmush R, Yarmush ML. Metabolic preconditioning of donor organs: defatting fatty livers by normothermic perfusion ex vivo. Metab Eng. 2009 Jul-Sep; 11(4-5):274-83.
    View in: PubMed
  87. Sharma NS, Wallenstein EJ, Novik E, Maguire T, Schloss R, Yarmush ML. Enrichment of hepatocyte-like cells with upregulated metabolic and differentiated function derived from embryonic stem cells using S-NitrosoAcetylPenicillamine. Tissue Eng Part C Methods. 2009 Jun; 15(2):297-306.
    View in: PubMed
  88. Chao P, Maguire T, Novik E, Cheng KC, Yarmush ML. Evaluation of a microfluidic based cell culture platform with primary human hepatocytes for the prediction of hepatic clearance in human. Biochem Pharmacol. 2009 Sep 15; 78(6):625-32.
    View in: PubMed
  89. Vitalo A, Fricchione J, Casali M, Berdichevsky Y, Hoge EA, Rauch SL, Berthiaume F, Yarmush ML, Benson H, Fricchione GL, Levine JB. Nest making and oxytocin comparably promote wound healing in isolation reared rats. PLoS One. 2009; 4(5):e5523.
    View in: PubMed
  90. Janorkar AV, King KR, Megeed Z, Yarmush ML. Development of an in vitro cell culture model of hepatic steatosis using hepatocyte-derived reporter cells. Biotechnol Bioeng. 2009 Apr 1; 102(5):1466-74.
    View in: PubMed
  91. Roach KL, King KR, Uygun K, Hand SC, Kohane IS, Yarmush ML, Toner M. High-throughput single cell arrays as a novel tool in biopreservation. Cryobiology. 2009 Jun; 58(3):315-21.
    View in: PubMed
  92. Jindal R, Nahmias Y, Tilles AW, Berthiaume F, Yarmush ML. Amino acid-mediated heterotypic interaction governs performance of a hepatic tissue model. FASEB J. 2009 Jul; 23(7):2288-98.
    View in: PubMed
  93. Duan X, Berthiaume F, Yarmush DM, Yarmush ML. Dissimilar hepatic protein expression profiles during the acute and flow phases following experimental thermal injury. Proteomics. 2009 Feb; 9(3):636-47.
    View in: PubMed
  94. Tolboom H, Pouw RE, Izamis ML, Milwid JM, Sharma N, Soto-Gutierrez A, Nahmias Y, Uygun K, Berthiaume F, Yarmush ML. Recovery of warm ischemic rat liver grafts by normothermic extracorporeal perfusion. Transplantation. 2009 Jan 27; 87(2):170-7.
    View in: PubMed
  95. Yarmush ML, King KR. Living-cell microarrays. Annu Rev Biomed Eng. 2009; 11:235-57.
    View in: PubMed
  96. Uygun BE, Sharma N, Yarmush M. Retinal pigment epithelium differentiation of stem cells: current status and challenges. Crit Rev Biomed Eng. 2009; 37(4-5):355-75.
    View in: PubMed
  97. Moore RN, Dasgupta A, Rajaei N, Yarmush ML, Toner M, Larue L, Moghe PV. Enhanced differentiation of embryonic stem cells using co-cultivation with hepatocytes. Biotechnol Bioeng. 2008 Dec 15; 101(6):1332-43.
    View in: PubMed
  98. Wallenstein EJ, Barminko J, Schloss RS, Yarmush ML. Transient gene delivery for functional enrichment of differentiating embryonic stem cells. Biotechnol Bioeng. 2008 Dec 1; 101(5):859-72.
    View in: PubMed
  99. Berdichevsky Y, Sabolek H, Levine JB, Staley KJ, Yarmush ML. Microfluidics and multielectrode array-compatible organotypic slice culture method. J Neurosci Methods. 2009 Mar 30; 178(1):59-64.
    View in: PubMed
  100. Yang E, Yarmush ML, Androulakis IP. Transcription factor network reconstruction using the living cell array. J Theor Biol. 2009 Feb 7; 256(3):393-407.
    View in: PubMed
  101. Cho CH, Berthiaume F, Tilles AW, Yarmush ML. A new technique for primary hepatocyte expansion in vitro. Biotechnol Bioeng. 2008 Oct 1; 101(2):345-56.
    View in: PubMed
  102. Novik EI, Barminko J, Maguire TJ, Sharma N, Wallenstein EJ, Schloss RS, Yarmush ML. Augmentation of EB-directed hepatocyte-specific function via collagen sandwich and SNAP. Biotechnol Prog. 2008 Sep-Oct; 24(5):1132-41.
    View in: PubMed
  103. Casali M, Zambonelli C, Goldwasser J, Vu HN, Yarmush ML. Moloney murine leukemia virus decay mediated by retroviral reverse transcriptase degradation of genomic RNA. Virology. 2008 Oct 10; 380(1):91-8.
    View in: PubMed
  104. Song Q, Risco R, Latina M, Berthiaume F, Nahmias Y, Yarmush ML. Selective targeting of pigmented retinal pigment epithelial (RPE) cells by a single pulsed laser irradiation: an in vitro study. Opt Express. 2008 Jul 7; 16(14):10518-28.
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  105. Tolboom H, Milwid JM, Izamis ML, Uygun K, Berthiaume F, Yarmush ML. Sequential cold storage and normothermic perfusion of the ischemic rat liver. Transplant Proc. 2008 Jun; 40(5):1306-9.
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  106. van Poll D, Parekkadan B, Cho CH, Berthiaume F, Nahmias Y, Tilles AW, Yarmush ML. Mesenchymal stem cell-derived molecules directly modulate hepatocellular death and regeneration in vitro and in vivo. Hepatology. 2008 May; 47(5):1634-43.
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  107. Nahmias Y, Goldwasser J, Casali M, van Poll D, Wakita T, Chung RT, Yarmush ML. Apolipoprotein B-dependent hepatitis C virus secretion is inhibited by the grapefruit flavonoid naringenin. Hepatology. 2008 May; 47(5):1437-45.
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  108. Parekkadan B, Tilles AW, Yarmush ML. Bone marrow-derived mesenchymal stem cells ameliorate autoimmune enteropathy independently of regulatory T cells. Stem Cells. 2008 Jul; 26(7):1913-9.
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  109. Casali M, Banta S, Zambonelli C, Megeed Z, Yarmush ML. Site-directed mutagenesis of the hinge peptide from the hemagglutinin protein: enhancement of the pH-responsive conformational change. Protein Eng Des Sel. 2008 Jun; 21(6):395-404.
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  110. Parekkadan B, Berdichevsky Y, Irimia D, Leeder A, Yarmush G, Toner M, Levine JB, Yarmush ML. Cell-cell interaction modulates neuroectodermal specification of embryonic stem cells. Neurosci Lett. 2008 Jun 20; 438(2):190-5.
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  111. He X, Park EY, Fowler A, Yarmush ML, Toner M. Vitrification by ultra-fast cooling at a low concentration of cryoprotectants in a quartz micro-capillary: a study using murine embryonic stem cells. Cryobiology. 2008 Jun; 56(3):223-32.
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  112. Li L, Sharma N, Chippada U, Jiang X, Schloss R, Yarmush ML, Langrana NA. Functional modulation of ES-derived hepatocyte lineage cells via substrate compliance alteration. Ann Biomed Eng. 2008 May; 36(5):865-76.
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  113. Park J, Li Y, Berthiaume F, Toner M, Yarmush ML, Tilles AW. Radial flow hepatocyte bioreactor using stacked microfabricated grooved substrates. Biotechnol Bioeng. 2008 Feb 1; 99(2):455-67.
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  114. Wang S, Nagrath D, Chen PC, Berthiaume F, Yarmush ML. Three-dimensional primary hepatocyte culture in synthetic self-assembling peptide hydrogel. Tissue Eng Part A. 2008 Feb; 14(2):227-36.
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  115. Berthiaume F, Barbe L, Mokuno Y, MacDonald AD, Jindal R, Yarmush ML. Steatosis reversibly increases hepatocyte sensitivity to hypoxia-reoxygenation injury. J Surg Res. 2009 Mar; 152(1):54-60.
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  116. Wang S, Nagrath D, Chen PC, Berthiaume F, Yarmush ML. Three-Dimensional Primary Hepatocyte Culture in Synthetic Self-Assembling Peptide Hydrogel. Tissue Eng. 2008 Jan 3.
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  117. Sharma G, Rege K, Budil DE, Yarmush ML, Mavroidis C. Reversible pH-controlled DNA-binding peptide nanotweezers: an in-silico study. Int J Nanomedicine. 2008; 3(4):505-21.
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  118. Soto-Gutierrez A, Basma H, Navarro-Alvarez N, Uygun BE, Yarmush ML, Kobayashi N, Fox IJ. Differentiating stem cells into liver. Biotechnol Genet Eng Rev. 2008; 25:149-63.
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  119. Sharma N, Schloss R, Yarmush M. What came first: fully functional or metabolically mature liver? Crit Rev Biomed Eng. 2008; 36(5-6):413-39.
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  120. Parashurama N, Nahmias Y, Cho CH, van Poll D, Tilles AW, Berthiaume F, Yarmush ML. Activin alters the kinetics of endoderm induction in embryonic stem cells cultured on collagen gels. Stem Cells. 2008 Feb; 26(2):474-84.
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  121. King KR, Wang S, Jayaraman A, Yarmush ML, Toner M. Microfluidic flow-encoded switching for parallel control of dynamic cellular microenvironments. Lab Chip. 2008 Jan; 8(1):107-16.
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  122. Swierczewska M, Hajicharalambous CS, Janorkar AV, Megeed Z, Yarmush ML, Rajagopalan P. Cellular response to nanoscale elastin-like polypeptide polyelectrolyte multilayers. Acta Biomater. 2008 Jul; 4(4):827-37.
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  123. Janorkar AV, Rajagopalan P, Yarmush ML, Megeed Z. The use of elastin-like polypeptide-polyelectrolyte complexes to control hepatocyte morphology and function in vitro. Biomaterials. 2008 Feb; 29(6):625-32.
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  124. Duan X, Yarmush D, Leeder A, Yarmush ML, Mitchell RN. Burn-induced immunosuppression: attenuated T cell signaling independent of IFN-gamma- and nitric oxide-mediated pathways. J Leukoc Biol. 2008 Feb; 83(2):305-13.
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  125. Vu HN, Li Y, Casali M, Irimia D, Megeed Z, Yarmush ML. A microfluidic bioreactor for increased active retrovirus output. Lab Chip. 2008 Jan; 8(1):75-80.
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  126. Levine JB, Leeder AD, Parekkadan B, Berdichevsky Y, Rauch SL, Smoller JW, Konradi C, Berthiaume F, Yarmush ML. Isolation rearing impairs wound healing and is associated with increased locomotion and decreased immediate early gene expression in the medial prefrontal cortex of juvenile rats. Neuroscience. 2008 Jan 24; 151(2):589-603.
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  127. Cho CH, Parashurama N, Park EY, Suganuma K, Nahmias Y, Park J, Tilles AW, Berthiaume F, Yarmush ML. Homogeneous differentiation of hepatocyte-like cells from embryonic stem cells: applications for the treatment of liver failure. FASEB J. 2008 Mar; 22(3):898-909.
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  128. Maguire T, Davidovich AE, Wallenstein EJ, Novik E, Sharma N, Pedersen H, Androulakis IP, Schloss R, Yarmush M. Control of hepatic differentiation via cellular aggregation in an alginate microenvironment. Biotechnol Bioeng. 2007 Oct 15; 98(3):631-44.
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  129. Parekkadan B, Sethu P, van Poll D, Yarmush ML, Toner M. Osmotic selection of human mesenchymal stem/progenitor cells from umbilical cord blood. Tissue Eng. 2007 Oct; 13(10):2465-73.
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  130. Parekkadan B, van Poll D, Suganuma K, Carter EA, Berthiaume F, Tilles AW, Yarmush ML. Mesenchymal stem cell-derived molecules reverse fulminant hepatic failure. PLoS One. 2007; 2(9):e941.
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  131. Yang E, Foteinou PT, King KR, Yarmush ML, Androulakis IP. A novel non-overlapping bi-clustering algorithm for network generation using living cell array data. Bioinformatics. 2007 Sep 1; 23(17):2306-13.
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  132. Jayaraman A, Maguire T, Vemula M, Kwon DW, Vannucci M, Berthiaume F, Yarmush ML. Gene expression profiling of long-term changes in rat liver following burn injury. J Surg Res. 2009 Mar; 152(1):3-17,17.e1-2.
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  133. Tolboom H, Pouw R, Uygun K, Tanimura Y, Izamis ML, Berthiaume F, Yarmush ML. A model for normothermic preservation of the rat liver. Tissue Eng. 2007 Aug; 13(8):2143-51.
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  134. Rege K, Patel SJ, Megeed Z, Yarmush ML. Amphipathic peptide-based fusion peptides and immunoconjugates for the targeted ablation of prostate cancer cells. Cancer Res. 2007 Jul 1; 67(13):6368-75.
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  135. Park J, Cho CH, Parashurama N, Li Y, Berthiaume F, Toner M, Tilles AW, Yarmush ML. Microfabrication-based modulation of embryonic stem cell differentiation. Lab Chip. 2007 Aug; 7(8):1018-28.
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  136. Parekkadan B, van Poll D, Megeed Z, Kobayashi N, Tilles AW, Berthiaume F, Yarmush ML. Immunomodulation of activated hepatic stellate cells by mesenchymal stem cells. Biochem Biophys Res Commun. 2007 Nov 16; 363(2):247-52.
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  137. Banta S, Vemula M, Yokoyama T, Jayaraman A, Berthiaume F, Yarmush ML. Contribution of gene expression to metabolic fluxes in hypermetabolic livers induced through burn injury and cecal ligation and puncture in rats. Biotechnol Bioeng. 2007 May 1; 97(1):118-37.
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  138. Cho CH, Park J, Nagrath D, Tilles AW, Berthiaume F, Toner M, Yarmush ML. Oxygen uptake rates and liver-specific functions of hepatocyte and 3T3 fibroblast co-cultures. Biotechnol Bioeng. 2007 May 1; 97(1):188-99.
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  139. Nagrath D, Avila-Elchiver M, Berthiaume F, Tilles AW, Messac A, Yarmush ML. Integrated energy and flux balance based multiobjective framework for large-scale metabolic networks. Ann Biomed Eng. 2007 Jun; 35(6):863-85.
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  140. Kidambi S, Sheng L, Yarmush ML, Toner M, Lee I, Chan C. Patterned co-culture of primary hepatocytes and fibroblasts using polyelectrolyte multilayer templates. Macromol Biosci. 2007 Mar 8; 7(3):344-53.
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  141. Banta S, Megeed Z, Casali M, Rege K, Yarmush ML. Engineering protein and peptide building blocks for nanotechnology. J Nanosci Nanotechnol. 2007 Feb; 7(2):387-401.
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  142. Yang E, Maguire T, Yarmush ML, Berthiaume F, Androulakis IP. Bioinformatics analysis of the early inflammatory response in a rat thermal injury model. BMC Bioinformatics. 2007; 8:10.
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  143. Nahmias Y, Berthiaume F, Yarmush ML. Integration of technologies for hepatic tissue engineering. Adv Biochem Eng Biotechnol. 2007; 103:309-29.
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  144. Shinoda M, Tilles AW, Kobayashi N, Wakabayashi G, Takayanagi A, Totsugawa T, Harada H, Obara H, Suganuma K, Berthiaume F, Shimazu M, Shimizu N, Tanaka N, Kitajima M, Tompkins RG, Toner M, Yarmush ML. A bioartificial liver device secreting interleukin-1 receptor antagonist for the treatment of hepatic failure in rats. J Surg Res. 2007 Jan; 137(1):130-40.
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  145. Guenat OT, Generelli S, de Rooij NF, Koudelka-Hep M, Berthiaume F, Yarmush ML. Development of an array of ion-selective microelectrodes aimed for the monitoring of extracellular ionic activities. Anal Chem. 2006 Nov 1; 78(21):7453-60.
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  146. Nahmias Y, Kramvis Y, Barbe L, Casali M, Berthiaume F, Yarmush ML. A novel formulation of oxygen-carrying matrix enhances liver-specific function of cultured hepatocytes. FASEB J. 2006 Dec; 20(14):2531-3.
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  147. van Poll D, Sokmensuer C, Ahmad N, Tilles AW, Berthiaume F, Toner M, Yarmush ML. Elevated hepatocyte-specific functions in fetal rat hepatocytes co-cultured with adult rat hepatocytes. Tissue Eng. 2006 Oct; 12(10):2965-73.
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  148. King KR, Wang S, Irimia D, Jayaraman A, Toner M, Yarmush ML. A high-throughput microfluidic real-time gene expression living cell array. Lab Chip. 2007 Jan; 7(1):77-85.
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  149. Mokuno Y, Berthiaume F, Tanimura Y, Yarmush ML. Heat shock preconditioning inhibits CD4+ T lymphocyte activation in transplanted fatty rat livers. J Surg Res. 2006 Sep; 135(1):92-9.
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  150. Sharma NS, Shikhanovich R, Schloss R, Yarmush ML. Sodium butyrate-treated embryonic stem cells yield hepatocyte-like cells expressing a glycolytic phenotype. Biotechnol Bioeng. 2006 Aug 20; 94(6):1053-63.
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  151. Kane BJ, Zinner MJ, Yarmush ML, Toner M. Liver-specific functional studies in a microfluidic array of primary mammalian hepatocytes. Anal Chem. 2006 Jul 1; 78(13):4291-8.
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  152. Duan X, Berthiaume F, Yarmush D, Yarmush ML. Proteomic analysis of altered protein expression in skeletal muscle of rats in a hypermetabolic state induced by burn sepsis. Biochem J. 2006 Jul 1; 397(1):149-58.
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  153. Novik EI, Maguire TJ, Orlova K, Schloss RS, Yarmush ML. Embryoid body-mediated differentiation of mouse embryonic stem cells along a hepatocyte lineage: insights from gene expression profiles. Tissue Eng. 2006 Jun; 12(6):1515-25.
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  154. Rajagopalan P, Shen CJ, Berthiaume F, Tilles AW, Toner M, Yarmush ML. Polyelectrolyte nano-scaffolds for the design of layered cellular architectures. Tissue Eng. 2006 Jun; 12(6):1553-63.
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  155. Shinoda M, Tilles AW, Wakabayashi G, Takayanagi A, Harada H, Obara H, Suganuma K, Berthiaume F, Shimazu M, Shimizu N, Kitajima M, Tompkins RG, Toner M, Yarmush ML. Treatment of fulminant hepatic failure in rats using a bioartificial liver device containing porcine hepatocytes producing interleukin-1 receptor antagonist. Tissue Eng. 2006 May; 12(5):1313-23.
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  156. Megeed Z, Winters RM, Yarmush ML. Modulation of single-chain antibody affinity with temperature-responsive elastin-like polypeptide linkers. Biomacromolecules. 2006 Apr; 7(4):999-1004.
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  157. Maguire T, Novik E, Schloss R, Yarmush M. Alginate-PLL microencapsulation: effect on the differentiation of embryonic stem cells into hepatocytes. Biotechnol Bioeng. 2006 Feb 20; 93(3):581-91.
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  158. Nahmias Y, Casali M, Barbe L, Berthiaume F, Yarmush ML. Liver endothelial cells promote LDL-R expression and the uptake of HCV-like particles in primary rat and human hepatocytes. Hepatology. 2006 Feb; 43(2):257-65.
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  159. Sharma NS, Ierapetritou MG, Yarmush ML. Novel quantitative tools for engineering analysis of hepatocyte cultures in bioartificial liver systems. Biotechnol Bioeng. 2005 Nov 5; 92(3):321-35.
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  160. Duan X, Yarmush D, Berthiaume F, Jayaraman A, Yarmush ML. Immunodepletion of albumin for two-dimensional gel detection of new mouse acute-phase protein and other plasma proteins. Proteomics. 2005 Oct; 5(15):3991-4000.
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  161. Wieder KJ, King KR, Thompson DM, Zia C, Yarmush ML, Jayaraman A. Optimization of reporter cells for expression profiling in a microfluidic device. Biomed Microdevices. 2005 Sep; 7(3):213-22.
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  162. Rajagopalan P, Berthiaume F, Tilles AW, Toner M, Yarmush ML. Selective enhancement of cytochrome p-450 activity in rat hepatocytes by in vitro heat shock. Tissue Eng. 2005 Sep-Oct; 11(9-10):1527-34.
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  163. Jayaraman A, Roberts KA, Yoon J, Yarmush DM, Duan X, Lee K, Yarmush ML. Identification of neutrophil gelatinase-associated lipocalin (NGAL) as a discriminatory marker of the hepatocyte-secreted protein response to IL-1beta: a proteomic analysis. Biotechnol Bioeng. 2005 Aug 20; 91(4):502-15.
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  164. Banta S, Yokoyama T, Berthiaume F, Yarmush ML. Effects of dehydroepiandrosterone administration on rat hepatic metabolism following thermal injury. J Surg Res. 2005 Aug; 127(2):93-105.
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  165. Park J, Berthiaume F, Toner M, Yarmush ML, Tilles AW. Microfabricated grooved substrates as platforms for bioartificial liver reactors. Biotechnol Bioeng. 2005 Jun 5; 90(5):632-44.
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  166. Yokoyama T, Banta S, Berthiaume F, Nagrath D, Tompkins RG, Yarmush ML. Evolution of intrahepatic carbon, nitrogen, and energy metabolism in a D-galactosamine-induced rat liver failure model. Metab Eng. 2005 Mar; 7(2):88-103.
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  167. Jayaraman A, Yarmush ML, Roth CM. Evaluation of an in vitro model of hepatic inflammatory response by gene expression profiling. Tissue Eng. 2005 Jan-Feb; 11(1-2):50-63.
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  168. Banta S, Yokoyama T, Berthiaume F, Yarmush ML. Quantitative effects of thermal injury and insulin on the metabolism of the skeletal muscle using the perfused rat hindquarter preparation. Biotechnol Bioeng. 2004 Dec 5; 88(5):613-29.
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  169. Li Z, Yarmush ML, Chan C. Insulin concentration during preconditioning mediates the regulation of urea synthesis during exposure to amino acid-supplemented plasma. Tissue Eng. 2004 Nov-Dec; 10(11-12):1737-46.
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  170. Chan C, Berthiaume F, Nath BD, Tilles AW, Toner M, Yarmush ML. Hepatic tissue engineering for adjunct and temporary liver support: critical technologies. Liver Transpl. 2004 Nov; 10(11):1331-42.
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  171. Duan X, Yarmush DM, Berthiaume F, Jayaraman A, Yarmush ML. A mouse serum two-dimensional gel map: application to profiling burn injury and infection. Electrophoresis. 2004 Sep; 25(17):3055-65.
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  172. Rosinski M, Yarmush ML, Berthiaume F. Quantitative dynamics of in vivo bone marrow neutrophil production and egress in response to injury and infection. Ann Biomed Eng. 2004 Aug; 32(8):1108-19.
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  173. Thompson DM, King KR, Wieder KJ, Toner M, Yarmush ML, Jayaraman A. Dynamic gene expression profiling using a microfabricated living cell array. Anal Chem. 2004 Jul 15; 76(14):4098-103.
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  174. Vemula M, Berthiaume F, Jayaraman A, Yarmush ML. Expression profiling analysis of the metabolic and inflammatory changes following burn injury in rats. Physiol Genomics. 2004 Jun 17; 18(1):87-98.
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  175. Duan X, Yarmush DM, Jayaraman A, Yarmush ML. Dispensable role for interferon-gamma in the burn-induced acute phase response: a proteomic analysis. Proteomics. 2004 Jun; 4(6):1830-9.
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  176. Revzin A, Rajagopalan P, Tilles AW, Berthiaume F, Yarmush ML, Toner M. Designing a hepatocellular microenvironment with protein microarraying and poly(ethylene glycol) photolithography. Langmuir. 2004 Apr 13; 20(8):2999-3005.
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  177. Kang YH, Berthiaume F, Nath BD, Yarmush ML. Growth factors and nonparenchymal cell conditioned media induce mitogenic responses in stable long-term adult rat hepatocyte cultures. Exp Cell Res. 2004 Feb 15; 293(2):239-47.
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  178. Mokuno Y, Berthiaume F, Tompkins RG, Balis UJ, Yarmush ML. Technique for expanding the donor liver pool: heat shock preconditioning in a rat fatty liver model. Liver Transpl. 2004 Feb; 10(2):264-72.
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  179. Davis HE, Rosinski M, Morgan JR, Yarmush ML. Charged polymers modulate retrovirus transduction via membrane charge neutralization and virus aggregation. Biophys J. 2004 Feb; 86(2):1234-42.
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  180. Lee K, Hwang D, Yokoyama T, Stephanopoulos G, Stephanopoulos GN, Yarmush ML. Identification of optimal classification functions for biological sample and state discrimination from metabolic profiling data. Bioinformatics. 2004 Apr 12; 20(6):959-69.
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  181. Mavroidis C, Dubey A, Yarmush ML. Molecular machines. Annu Rev Biomed Eng. 2004; 6:363-95.
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  182. Lee K, Berthiaume F, Stephanopoulos GN, Yarmush ML. Induction of a hypermetabolic state in cultured hepatocytes by glucagon and H2O2. Metab Eng. 2003 Oct; 5(4):221-9.
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  183. Lee K, Berthiaume F, Stephanopoulos GN, Yarmush ML. Profiling of dynamic changes in hypermetabolic livers. Biotechnol Bioeng. 2003 Aug 20; 83(4):400-15.
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  184. Shito M, Tilles AW, Tompkins RG, Yarmush ML, Toner M. Efficacy of an extracorporeal flat-plate bioartificial liver in treating fulminant hepatic failure. J Surg Res. 2003 May 1; 111(1):53-62.
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  185. Berthiaume F, MacDonald AD, Kang YH, Yarmush ML. Control analysis of mitochondrial metabolism in intact hepatocytes: effect of interleukin-1beta and interleukin-6. Metab Eng. 2003 Apr; 5(2):108-23.
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  186. Chan C, Hwang D, Stephanopoulos GN, Yarmush ML, Stephanopoulos G. Application of multivariate analysis to optimize function of cultured hepatocytes. Biotechnol Prog. 2003 Mar-Apr; 19(2):580-98.
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  187. Madibally SV, Solomon V, Mitchell RN, Van De Water L, Yarmush ML, Toner M. Influence of insulin therapy on burn wound healing in rats. J Surg Res. 2003 Feb; 109(2):92-100.
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  188. Chan C, Berthiaume F, Lee K, Yarmush ML. Metabolic flux analysis of cultured hepatocytes exposed to plasma. Biotechnol Bioeng. 2003 Jan 5; 81(1):33-49.
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  189. Yarmush ML, Banta S. Metabolic engineering: advances in modeling and intervention in health and disease. Annu Rev Biomed Eng. 2003; 5:349-81.
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  190. Chan C, Berthiaume F, Lee K, Yarmush ML. Metabolic flux analysis of hepatocyte function in hormone- and amino acid-supplemented plasma. Metab Eng. 2003 Jan; 5(1):1-15.
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  191. Madihally SV, Toner M, Yarmush ML, Mitchell RN. Interferon gamma modulates trauma-induced muscle wasting and immune dysfunction. Ann Surg. 2002 Nov; 236(5):649-57.
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  192. Kang YH, Berthiaume F, Yarmush ML. Long-term stable cultures of rat hepatocytes: an in vitro model to study acute and chronic hepatic inflammation. Tissue Eng. 2002 Aug; 8(4):681-93.
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  193. Balis UJ, Yarmush ML, Toner M. Bioartificial liver process monitoring and control systems with integrated systems capability. Tissue Eng. 2002 Jul; 8(3):483-98.
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  194. Chan C, Berthiaume F, Washizu J, Toner M, Yarmush ML. Metabolic pre-conditioning of cultured cells in physiological levels of insulin: generating resistance to the lipid-accumulating effects of plasma in hepatocytes. Biotechnol Bioeng. 2002 Jun 30; 78(7):753-60.
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  195. Davis HE, Morgan JR, Yarmush ML. Polybrene increases retrovirus gene transfer efficiency by enhancing receptor-independent virus adsorption on target cell membranes. Biophys Chem. 2002 Jun 19; 97(2-3):159-72.
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  196. Solomon V, Madihally S, Mitchell RN, Yarmush M, Toner M. Antiproteolytic action of insulin in burn-injured rats. J Surg Res. 2002 Jun 15; 105(2):234-42.
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  197. Yarmush ML, Jayaraman A. Advances in proteomic technologies. Annu Rev Biomed Eng. 2002; 4:349-73.
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  198. Tilles AW, Berthiaume F, Yarmush ML, Tompkins RG, Toner M. Bioengineering of liver assist devices. J Hepatobiliary Pancreat Surg. 2002; 9(6):686-96.
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  199. Walton SP, Stephanopoulos GN, Yarmush ML, Roth CM. Thermodynamic and kinetic characterization of antisense oligodeoxynucleotide binding to a structured mRNA. Biophys J. 2002 Jan; 82(1 Pt 1):366-77.
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  200. Tilles AW, Berthiaume F, Yarmush ML, Toner M. Critical issues in bioartificial liver development. Technol Health Care. 2002; 10(3-4):177-86.
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  201. Washizu J, Berthiaume F, Mokuno Y, Tompkins RG, Toner M, Yarmush ML. Long-term maintenance of cytochrome P450 activities by rat hepatocyte/3T3 cell co-cultures in heparinized human plasma. Tissue Eng. 2001 Dec; 7(6):691-703.
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  202. Baskaran H, Toner M, Yarmush ML, Berthiaume F. Poloxamer-188 improves capillary blood flow and tissue viability in a cutaneous burn wound. J Surg Res. 2001 Nov; 101(1):56-61.
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  203. Roy P, Baskaran H, Tilles AW, Yarmush ML, Toner M. Analysis of oxygen transport to hepatocytes in a flat-plate microchannel bioreactor. Ann Biomed Eng. 2001 Nov; 29(11):947-55.
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  204. Le Doux JM, Landazuri N, Yarmush ML, Morgan JR. Complexation of retrovirus with cationic and anionic polymers increases the efficiency of gene transfer. Hum Gene Ther. 2001 Sep 1; 12(13):1611-21.
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  205. Jayaraman A, Walton SP, Yarmush ML, Roth CM. Rational selection and quantitative evaluation of antisense oligonucleotides. Biochim Biophys Acta. 2001 Aug 30; 1520(2):105-14.
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  206. Arai K, Lee K, Berthiaume F, Tompkins RG, Yarmush ML. Intrahepatic amino acid and glucose metabolism in a D-galactosamine-induced rat liver failure model. Hepatology. 2001 Aug; 34(2):360-71.
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  207. Shito M, Balis UJ, Tompkins RG, Yarmush ML, Toner M. A fulminant hepatic failure model in the rat: involvement of interleukin-1beta and tumor necrosis factor-alpha. Dig Dis Sci. 2001 Aug; 46(8):1700-8.
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  208. Shito M, Kim NH, Baskaran H, Tilles AW, Tompkins RG, Yarmush ML, Toner M. In vitro and in vivo evaluation of albumin synthesis rate of porcine hepatocytes in a flat-plate bioreactor. Artif Organs. 2001 Jul; 25(7):571-8.
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  209. Tilles AW, Baskaran H, Roy P, Yarmush ML, Toner M. Effects of oxygenation and flow on the viability and function of rat hepatocytes cocultured in a microchannel flat-plate bioreactor. Biotechnol Bioeng. 2001 Jun 5; 73(5):379-89.
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  210. Andreadis ST, Hamoen KE, Yarmush ML, Morgan JR. Keratinocyte growth factor induces hyperproliferation and delays differentiation in a skin equivalent model system. FASEB J. 2001 Apr; 15(6):898-906.
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  211. Madihally SV, Toner M, Yarmush ML, Mitchell RN. Peripheral blood mononuclear cells exhibit hypercatabolic activity in response to thermal injury correlating with diminished MHC I expression. J Trauma. 2001 Mar; 50(3):500-9.
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  212. Roth CM, Kohen RL, Walton SP, Yarmush ML. Coupling of inflammatory cytokine signaling pathways probed by measurements of extracellular acidification rate. Biophys Chem. 2001 Jan 31; 89(1):1-12.
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  213. Roy P, Washizu J, Tilles AW, Yarmush ML, Toner M. Effect of flow on the detoxification function of rat hepatocytes in a bioartificial liver reactor. Cell Transplant. 2001; 10(7):609-14.
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  214. Behnia K, Bhatia S, Jastromb N, Balis U, Sullivan S, Yarmush M, Toner M. Xenobiotic metabolism by cultured primary porcine hepatocytes. Tissue Eng. 2000 Oct; 6(5):467-79.
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  215. Washizu J, Berthiaume F, Chan C, Tompkins RG, Toner M, Yarmush ML. Optimization of rat hepatocyte culture in citrated human plasma. J Surg Res. 2000 Oct; 93(2):237-46.
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  216. Washizu J, Chan C, Berthiaume F, Tompkins RG, Toner M, Yarmush ML. Amino acid supplementation improves cell-specific functions of the rat hepatocytes exposed to human plasma. Tissue Eng. 2000 Oct; 6(5):497-504.
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  217. Lee K, Berthiaume F, Stephanopoulos GN, Yarmush DM, Yarmush ML. Metabolic flux analysis of postburn hepatic hypermetabolism. Metab Eng. 2000 Oct; 2(4):312-27.
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  218. Solomon V, Madihally S, Yarmush M, Toner M. Insulin suppresses the increased activities of lysosomal cathepsins and ubiquitin conjugation system in burn-injured rats. J Surg Res. 2000 Sep; 93(1):120-6.
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  219. Baskaran H, Yarmush ML, Berthiaume F. Dynamics of tissue neutrophil sequestration after cutaneous burns in rats. J Surg Res. 2000 Sep; 93(1):88-96.
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  220. Jayaraman A, Yarmush ML, Roth CM. Dynamics of gene expression in rat hepatocytes under stress. Metab Eng. 2000 Jul; 2(3):239-51.
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  221. Busch NA, Zanzot EM, Loiselle PM, Carter EA, Allaire JE, Yarmush ML, Warren HS. A model of infected burn wounds using Escherichia coli O18:K1:H7 for the study of gram-negative bacteremia and sepsis. Infect Immun. 2000 Jun; 68(6):3349-51.
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  222. Andreadis S, Lavery T, Davis HE, Le Doux JM, Yarmush ML, Morgan JR. Toward a more accurate quantitation of the activity of recombinant retroviruses: alternatives to titer and multiplicity of infection. J Virol. 2000 Apr; 74(7):3431-9.
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  223. Pins GD, Collins-Pavao ME, Van De Water L, Yarmush ML, Morgan JR. Plasmin triggers rapid contraction and degradation of fibroblast-populated collagen lattices. J Invest Dermatol. 2000 Apr; 114(4):647-53.
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  224. Andreadis S, Lavery T, Davis HE, Le Doux JM, Yarmush ML, Morgan JR. Toward a more accurate quantitation of the activity of recombinant retroviruses: alternatives to titer and multiplicity of infection. J Virol. 2000 Feb; 74(3):1258-66.
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  225. Roy P, Roth CM, Margolies MN, Yarmush ML. Aromatic residues mediate the pressure-induced association of digoxigenin and antibody 26-10. Biophys Chem. 2000 Jan 24; 83(3):171-7.
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  226. Roy P, Roth CM, Margolies MN, Yarmush ML. Effect of pressure on antigen-antibody complexes: modulation by temperature and ionic strength. Mol Immunol. 1999 Dec; 36(17):1149-58.
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  227. Berthiaume F, Aparicio CL, Eungdamrong J, Yarmush ML. Age- and disease-related decline in immune function: an opportunity for "thymus-boosting" therapies. Tissue Eng. 1999 Dec; 5(6):499-514.
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  228. Bhatia SN, Balis UJ, Yarmush ML, Toner M. Effect of cell-cell interactions in preservation of cellular phenotype: cocultivation of hepatocytes and nonparenchymal cells. FASEB J. 1999 Nov; 13(14):1883-900.
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  229. Walton SP, Stephanopoulos GN, Yarmush ML, Roth CM. Prediction of antisense oligonucleotide binding affinity to a structured RNA target. Biotechnol Bioeng. 1999 Oct 5; 65(1):1-9.
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  230. Lee K, Berthiaume F, Stephanopoulos GN, Yarmush ML. Metabolic flux analysis: a powerful tool for monitoring tissue function. Tissue Eng. 1999 Aug; 5(4):347-68.
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  231. Yarmush DM, MacDonald AD, Foy BD, Berthiaume F, Tompkins RG, Yarmush ML. Cutaneous burn injury alters relative tricarboxylic acid cycle fluxes in rat liver. J Burn Care Rehabil. 1999 Jul-Aug; 20(4):292-302.
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  232. Le Doux JM, Davis HE, Morgan JR, Yarmush ML. Kinetics of retrovirus production and decay. Biotechnol Bioeng. 1999 Jun 20; 63(6):654-62.
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  233. Le Doux JM, Morgan JR, Yarmush ML. Differential inhibition of retrovirus transduction by proteoglycans and free glycosaminoglycans. Biotechnol Prog. 1999 May-Jun; 15(3):397-406.
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  234. Ledezma GA, Folch A, Bhatia SN, Balis UJ, Yarmush ML, Toner M. Numerical model of fluid flow and oxygen transport in a radial-flow microchannel containing hepatocytes. J Biomech Eng. 1999 Feb; 121(1):58-64.
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  235. Eming SA, Yarmush ML, Krueger GG, Morgan JR. Regulation of the spatial organization of mesenchymal connective tissue: effects of cell-associated versus released isoforms of platelet-derived growth factor. Am J Pathol. 1999 Jan; 154(1):281-9.
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  236. Balis UJ, Behnia K, Dwarakanath B, Bhatia SN, Sullivan SJ, Yarmush ML, Toner M. Oxygen consumption characteristics of porcine hepatocytes. Metab Eng. 1999 Jan; 1(1):49-62.
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  237. Roth CM, Yarmush ML. Nucleic acid biotechnology. Annu Rev Biomed Eng. 1999; 1:265-97.
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  238. Andreadis ST, Roth CM, Le Doux JM, Morgan JR, Yarmush ML. Large-scale processing of recombinant retroviruses for gene therapy. Biotechnol Prog. 1999 Jan-Feb; 15(1):1-11.
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  239. Bhatia SN, Yarmush ML, Toner M. Micropatterning cells in tissue engineering. Methods Mol Med. 1999; 18:349-63.
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  240. Berthiaume F, Tompkins RG, Yarmush ML. Isolation and long-term maintenance of adult rat hepatocytes in culture. Methods Mol Med. 1999; 18:447-56.
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  241. Busch NA, Yarmush ML, Toner M. A theoretical formalism for aggregation of peroxidized lipids and plasma membrane stability during photolysis. Biophys J. 1998 Dec; 75(6):2956-70.
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  242. Busch NA, Reiken SR, Toner M, Yarmush ML. Intracellular calcium dynamics during photolysis. J Biomech Eng. 1998 Oct; 120(5):570-8.
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  243. Karlsson JO, Yarmush ML, Toner M. Interaction between heat shock and interleukin 6 stimulation in the acute-phase response of human hepatoma (HepG2) cells. Hepatology. 1998 Oct; 28(4):994-1004.
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  244. Sundaram S, Roth CM, Yarmush ML. Pressure-induced dissociation of antigen-antibody complexes. Biotechnol Prog. 1998 Sep-Oct; 14(5):773-81.
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  245. Bhatia SN, Balis UJ, Yarmush ML, Toner M. Microfabrication of hepatocyte/fibroblast co-cultures: role of homotypic cell interactions. Biotechnol Prog. 1998 May-Jun; 14(3):378-87.
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  246. Le Doux JM, Morgan JR, Yarmush ML. Removal of proteoglycans increases efficiency of retroviral gene transfer. Biotechnol Bioeng. 1998 Apr 5; 58(1):23-34.
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  247. Zupke CA, Stefanovich P, Berthiaume F, Yarmush ML. Metabolic effects of stress mediators on cultured hepatocytes. Biotechnol Bioeng. 1998 Apr 20-May 5; 58(2-3):222-30.
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  248. Eming SA, Medalie DA, Tompkins RG, Yarmush ML, Morgan JR. Genetically modified human keratinocytes overexpressing PDGF-A enhance the performance of a composite skin graft. Hum Gene Ther. 1998 Mar 1; 9(4):529-39.
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  249. Bhatia SN, Balis UJ, Yarmush ML, Toner M. Probing heterotypic cell interactions: hepatocyte function in microfabricated co-cultures. J Biomater Sci Polym Ed. 1998; 9(11):1137-60.
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  250. Moghe PV, Coger RN, Toner M, Yarmush ML. Cell-cell interactions are essential for maintenance of hepatocyte function in collagen gel but not on matrigel. Biotechnol Bioeng. 1997 Dec 20; 56(6):706-11.
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  251. Aparicio CL, Strong LH, Yarmush ML, Berthiaume F. Correction for label leakage in fluorimetric assays of cell adhesion. Biotechniques. 1997 Dec; 23(6):1056-60.
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  252. Rajur SB, Roth CM, Morgan JR, Yarmush ML. Covalent protein-oligonucleotide conjugates for efficient delivery of antisense molecules. Bioconjug Chem. 1997 Nov-Dec; 8(6):935-40.
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  253. Medalie DA, Eming SA, Collins ME, Tompkins RG, Yarmush ML, Morgan JR. Differences in dermal analogs influence subsequent pigmentation, epidermal differentiation, basement membrane, and rete ridge formation of transplanted composite skin grafts. Transplantation. 1997 Aug 15; 64(3):454-65.
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  254. Roth CM, Reiken SR, Le Doux JM, Rajur SB, Lu XM, Morgan JR, Yarmush ML. Targeted antisense modulation of inflammatory cytokine receptors. Biotechnol Bioeng. 1997 Jul 5; 55(1):72-81.
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  255. Bischof JC, Ryan CM, Tompkins RG, Yarmush ML, Toner M. Ice formation in isolated human hepatocytes and human liver tissue. ASAIO J. 1997 Jul-Aug; 43(4):271-8.
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  256. Yarmush ML, Berthiaume F. Metabolic engineering and human disease. Nat Biotechnol. 1997 Jun; 15(6):525-8.
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  257. Zupke C, Tompkins R, Yarmush D, Yarmush M. Numerical isotopomer analysis: estimation of metabolic activity. Anal Biochem. 1997 May 1; 247(2):287-93.
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  258. Yamaguchi Y, Yu YM, Zupke C, Yarmush DM, Berthiaume F, Tompkins RG, Yarmush ML. Effect of burn injury on glucose and nitrogen metabolism in the liver: preliminary studies in a perfused liver system. Surgery. 1997 Mar; 121(3):295-303.
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  259. Bhatia SN, Yarmush ML, Toner M. Controlling cell interactions by micropatterning in co-cultures: hepatocytes and 3T3 fibroblasts. J Biomed Mater Res. 1997 Feb; 34(2):189-99.
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  260. Reiken SR, Wolfort SF, Berthiaume F, Compton C, Tompkins RG, Yarmush ML. Control of hypertrophic scar growth using selective photothermolysis. Lasers Surg Med. 1997; 21(1):7-12.
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  261. Strong LH, Berthiaume F, Yarmush ML. Control of fibroblast populated collagen lattice contraction by antibody targeted photolysis of fibroblasts. Lasers Surg Med. 1997; 21(3):235-47.
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  262. Berthiaume F, Moghe PV, Toner M, Yarmush ML. Effect of extracellular matrix topology on cell structure, function, and physiological responsiveness: hepatocytes cultured in a sandwich configuration. FASEB J. 1996 Nov; 10(13):1471-84.
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  263. Stefanovich P, Matthew HW, Toner M, Tompkins RG, Yarmush ML. Extracorporeal plasma perfusion of cultured hepatocytes: effect of intermittent perfusion on hepatocyte function and morphology. J Surg Res. 1996 Nov; 66(1):57-63.
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  264. Eming SA, Yarmush ML, Morgan JR. Enhanced function of cultured epithelium by genetic modification: Cell-based synthesis and delivery of growth factors. Biotechnol Bioeng. 1996 Oct 5; 52(1):15-23.
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  265. Russotti G, Brieva TA, Toner M, Yarmush ML. Induction of tolerance to hypothermia by previous heat shock using human fibroblasts in culture. Cryobiology. 1996 Oct; 33(5):567-80.
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  266. Yarmush ML, Patankar DB, Yarmush DM. An analysis of transport resistances in the operation of BIAcore; implications for kinetic studies of biospecific interactions. Mol Immunol. 1996 Oct; 33(15):1203-14.
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  267. Le Doux JM, Morgan JR, Snow RG, Yarmush ML. Proteoglycans secreted by packaging cell lines inhibit retrovirus infection. J Virol. 1996 Sep; 70(9):6468-73.
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  268. Matthew HW, Sternberg J, Stefanovich P, Morgan JR, Toner M, Tompkins RG, Yarmush ML. Effects of plasma exposure on cultured hepatocytes: Implications for bioartificial liver support. Biotechnol Bioeng. 1996 Jul 5; 51(1):100-11.
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  269. Medalie DA, Eming SA, Tompkins RG, Yarmush ML, Krueger GG, Morgan JR. Evaluation of human skin reconstituted from composite grafts of cultured keratinocytes and human acellular dermis transplanted to athymic mice. J Invest Dermatol. 1996 Jul; 107(1):121-7.
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  270. Eming SA, Snow RG, Yarmush ML, Morgan JR. Targeted expression of insulin-like growth factor to human keratinocytes: modification of the autocrine control of keratinocyte proliferation. J Invest Dermatol. 1996 Jul; 107(1):113-20.
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  271. Aparicio CL, Berthiaume F, Chang CC, Yarmush ML. Tumor necrosis factor-alpha (TNF-alpha) induces a reversible, time- and dose-dependent adhesion of progenitor T cells to endothelial cells. Mol Immunol. 1996 May-Jun; 33(7-8):671-80.
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  272. Wolfort SF, Reiken SR, Berthiaume F, Tompkins RG, Yarmush ML. Control of hypertrophic scar growth using antibody-targeted photolysis. J Surg Res. 1996 Apr; 62(1):17-22.
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  273. Moghe PV, Berthiaume F, Ezzell RM, Toner M, Tompkins RG, Yarmush ML. Culture matrix configuration and composition in the maintenance of hepatocyte polarity and function. Biomaterials. 1996 Feb; 17(3):373-85.
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  274. Eming SA, Lee J, Snow RG, Tompkins RG, Yarmush ML, Morgan JR. Genetically modified human epidermis overexpressing PDGF-A directs the development of a cellular and vascular connective tissue stroma when transplanted to athymic mice--implications for the use of genetically modified keratinocytes to modulate dermal regeneration. J Invest Dermatol. 1995 Dec; 105(6):756-63.
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  275. Morgan JR, LeDoux JM, Snow RG, Tompkins RG, Yarmush ML. Retrovirus infection: effect of time and target cell number. J Virol. 1995 Nov; 69(11):6994-7000.
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  276. Stefanovich P, Ezzell RM, Sheehan SJ, Tompkins RG, Yarmush ML, Toner M. Effects of hypothermia on the function, membrane integrity, and cytoskeletal structure of hepatocytes. Cryobiology. 1995 Aug; 32(4):389-403.
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  277. Bischof JC, Padanilam J, Holmes WH, Ezzell RM, Lee RC, Tompkins RG, Yarmush ML, Toner M. Dynamics of cell membrane permeability changes at supraphysiological temperatures. Biophys J. 1995 Jun; 68(6):2608-14.
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  278. Thorpe WP, Toner M, Ezzell RM, Tompkins RG, Yarmush ML. Dynamics of photoinduced cell plasma membrane injury. Biophys J. 1995 May; 68(5):2198-206.
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  279. Rotem A, Matthew HW, Hsiao PH, Toner M, Tompkins RG, Yarmush ML. The activity of cytochrome P450IA1 in stable cultured rat hepatocytes. Toxicol In Vitro. 1995 Apr; 9(2):139-49.
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  280. Strong L, Yarmush DM, Yarmush ML. Antibody-targeted photolysis. Photophysical, biochemical, and pharmacokinetic properties of antibacterial conjugates. Ann N Y Acad Sci. 1994 Nov 30; 745:297-320.
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  281. Bhatia SN, Toner M, Tompkins RG, Yarmush ML. Selective adhesion of hepatocytes on patterned surfaces. Ann N Y Acad Sci. 1994 Nov 30; 745:187-209.
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  282. Foy BD, Rotem A, Toner M, Tompkins RG, Yarmush ML. A device to measure the oxygen uptake rate of attached cells: importance in bioartificial organ design. Cell Transplant. 1994 Nov-Dec; 3(6):515-27.
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  283. Berthiaume F, Reiken SR, Toner M, Tompkins RG, Yarmush ML. Antibody-targeted photolysis of bacteria in vivo. Biotechnology (N Y). 1994 Jul; 12(7):703-6.
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  284. Morgan JR, Lee J, Tompkins RG, Yarmush ML. Rapid quantitation of recombinant retroviruses. Biotechnol Prog. 1994 Jul-Aug; 10(4):441-6.
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  285. Padanilam JT, Bischof JC, Lee RC, Cravalho EG, Tompkins RG, Yarmush ML, Toner M. Effectiveness of poloxamer 188 in arresting calcein leakage from thermally damaged isolated skeletal muscle cells. Ann N Y Acad Sci. 1994 May 31; 720:111-23.
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  286. Stevens EJ, Ryan CM, Friedberg JS, Barnhill RL, Yarmush ML, Tompkins RG. A quantitative model of invasive Pseudomonas infection in burn injury. J Burn Care Rehabil. 1994 May-Jun; 15(3):232-5.
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  287. Borel Rinkes IH, Toner M, Tompkins RG, Yarmush ML. An extracorporeal microscopy perfusion chamber for on-line studies of environmental effects on cultured hepatocytes. J Biomech Eng. 1994 May; 116(2):135-9.
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  288. Lin K, Nagy JA, Xu H, Shockley TR, Yarmush ML, Dvorak HF. Compartmental distribution of tumor-specific monoclonal antibodies in human melanoma xenografts. Cancer Res. 1994 Apr 15; 54(8):2269-77.
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  289. Foy BD, Toner M, Tompkins RG, Yarmush ML. Engineering organ perfusion protocols: NMR analysis of hepatocyte isolation from perfused rat liver. Biotechnol Bioeng. 1994 Mar 25; 43(7):661-72.
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  290. Rotem A, Toner M, Bhatia S, Foy BD, Tompkins RG, Yarmush ML. Oxygen is a factor determining in vitro tissue assembly: Effects on attachment and spreading of hepatocytes. Biotechnol Bioeng. 1994 Mar 25; 43(7):654-60.
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  291. Berthiaume F, Ezzell RM, Toner M, Yarmush ML, Tompkins RG. Transport of fluorescent dextrans across the rat ileum after cutaneous thermal injury. Crit Care Med. 1994 Mar; 22(3):455-64.
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  292. Lu XM, Fischman AJ, Jyawook SL, Hendricks K, Tompkins RG, Yarmush ML. Antisense DNA delivery in vivo: liver targeting by receptor-mediated uptake. J Nucl Med. 1994 Feb; 35(2):269-75.
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  293. Karlsson JO, Cravalho EG, Borel Rinkes IH, Tompkins RG, Yarmush ML, Toner M. Nucleation and growth of ice crystals inside cultured hepatocytes during freezing in the presence of dimethyl sulfoxide. Biophys J. 1993 Dec; 65(6):2524-36.
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  294. Ezzell RM, Toner M, Hendricks K, Dunn JC, Tompkins RG, Yarmush ML. Effect of collagen gel configuration on the cytoskeleton in cultured rat hepatocytes. Exp Cell Res. 1993 Oct; 208(2):442-52.
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  295. Ezzell RM, Carter EA, Yarmush ML, Tompkins RG. Thermal injury-induced changes in the rat intestine brush border cytoskeleton. Surgery. 1993 Sep; 114(3):591-7.
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  296. Foy BD, Lee J, Morgan J, Toner M, Tompkins RG, Yarmush ML. Optimization of hepatocyte attachment to microcarriers: Importance of oxygen. Biotechnol Bioeng. 1993 Aug 20; 42(5):579-88.
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  297. Horwitz JI, Toner M, Tompkins RG, Yarmush ML. Immobilized IL-2 preserves the viability of an IL-2 dependent cell line. Mol Immunol. 1993 Aug; 30(11):1041-8.
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  298. Toner M, Cravalho EG, Stachecki J, Fitzgerald T, Tompkins RG, Yarmush ML, Armant DR. Nonequilibrium freezing of one-cell mouse embryos. Membrane integrity and developmental potential. Biophys J. 1993 Jun; 64(6):1908-21.
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  299. Closs EI, Borel Rinkes IH, Bader A, Yarmush ML, Cunningham JM. Retroviral infection and expression of cationic amino acid transporters in rodent hepatocytes. J Virol. 1993 Apr; 67(4):2097-102.
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  300. Lee J, Morgan JR, Tompkins RG, Yarmush ML. Proline-mediated enhancement of hepatocyte function in a collagen gel sandwich culture configuration. FASEB J. 1993 Apr 1; 7(6):586-91.
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  301. Dunn JC, Tompkins RG, Yarmush ML. Dynamics of transcriptional and translational processes in hepatocytes cultured in a collagen sandwich. Biotechnol Bioeng. 1993 Mar 5; 41(5):593-8.
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  302. Dionne KE, Colton CK, Yarmush ML. Effect of hypoxia on insulin secretion by isolated rat and canine islets of Langerhans. Diabetes. 1993 Jan; 42(1):12-21.
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  303. Nathan A, Zalipsky S, Ertel SI, Agathos SN, Yarmush ML, Kohn J. Copolymers of lysine and polyethylene glycol: a new family of functionalized drug carriers. Bioconjug Chem. 1993 Jan-Feb; 4(1):54-62.
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  304. Ryan CM, Carter EA, Jenkins RL, Sterling LM, Yarmush ML, Malt RA, Tompkins RG. Isolation and long-term culture of human hepatocytes. Surgery. 1993 Jan; 113(1):48-54.
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  305. Yarmush ML, Thorpe WP, Strong L, Rakestraw SL, Toner M, Tompkins RG. Antibody Targeted Photolysis. Crit Rev Ther Drug Carrier Syst. 1993; 10(3):197-252.
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  306. Rotem A, Toner M, Tompkins RG, Yarmush ML. Oxygen uptake rates in cultured rat hepatocytes. Biotechnol Bioeng. 1992 Dec 5; 40(10):1286-91.
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  307. Yarmush ML, Lu XM, Yarmush DM. Coupling of antibody-binding fragments to solid-phase supports: site-directed binding of F(ab')2 fragments. J Biochem Biophys Methods. 1992 Dec; 25(4):285-97.
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  308. Lu XM, Fischman AJ, Stevens E, Lee TT, Strong L, Tompkins RG, Yarmush ML. Sn-chlorin e6 antibacterial immunoconjugates. An in vitro and in vivo analysis. J Immunol Methods. 1992 Nov 25; 156(1):85-99.
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  309. Ryan CM, Yarmush ML, Burke JF, Tompkins RG. Increased gut permeability early after burns correlates with the extent of burn injury. Crit Care Med. 1992 Nov; 20(11):1508-12.
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  310. Yarmush ML, Toner M, Dunn JC, Rotem A, Hubel A, Tompkins RG. Hepatic tissue engineering. Development of critical technologies. Ann N Y Acad Sci. 1992 Oct 13; 665:238-52.
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  311. Dunn JC, Friedberg JS, Tompkins RG, Yarmush ML. Hepatocytes from rat liver perfusions. Physicochemical effects on polyribosome size. ASAIO J. 1992 Oct-Dec; 38(4):841-5.
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  312. Borel Rinkes IH, Toner M, Ezzell RM, Tompkins RG, Yarmush ML. Effects of dimethyl sulfoxide on cultured rat hepatocytes in sandwich configuration. Cryobiology. 1992 Aug; 29(4):443-53.
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  313. Fischman AJ, Fucello AJ, Pellegrino-Gensey JL, Geltofsky J, Yarmush ML, Rubin RH, Strauss HW. Effect of carbohydrate modification on the localization of human polyclonal IgG at focal sites of bacterial infection. J Nucl Med. 1992 Jul; 33(7):1378-82.
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  314. Lee J, Morgan JR, Tompkins RG, Yarmush ML. The importance of proline on long-term hepatocyte function in a collagen gel sandwich configuration: regulation of protein secretion. Biotechnol Bioeng. 1992 Jun 20; 40(2):298-305.
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  315. Park H, Wang DI, Yarmush ML. A rapid, simple immunofluorometric assay: development and characterization. Biotechnol Bioeng. 1992 Jun 20; 40(2):313-21.
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  316. Yarmush ML, Antonsen KP, Sundaram S, Yarmush DM. Immunoadsorption: strategies for antigen elution and production of reusable adsorbents. Biotechnol Prog. 1992 May-Jun; 8(3):168-78.
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  317. Bader A, Borel Rinkes IH, Closs EI, Ryan CM, Toner M, Cunningham JM, Tompkins RG, Yarmush ML. A stable long-term hepatocyte culture system for studies of physiologic processes: cytokine stimulation of the acute phase response in rat and human hepatocytes. Biotechnol Prog. 1992 May-Jun; 8(3):219-25.
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  318. Ryan CM, Yarmush ML, Tompkins RG. Separation and quantitation of polyethylene glycols 400 and 3350 from human urine by high-performance liquid chromatography. J Pharm Sci. 1992 Apr; 81(4):350-2.
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  319. Dunn JC, Tompkins RG, Yarmush ML. Hepatocytes in collagen sandwich: evidence for transcriptional and translational regulation. J Cell Biol. 1992 Feb; 116(4):1043-53.
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  320. Shockley TR, Lin K, Sung C, Nagy JA, Tompkins RG, Dedrick RL, Dvorak HF, Yarmush ML. A quantitative analysis of tumor specific monoclonal antibody uptake by human melanoma xenografts: effects of antibody immunological properties and tumor antigen expression levels. Cancer Res. 1992 Jan 15; 52(2):357-66.
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  321. Shockley TR, Lin K, Nagy JA, Tompkins RG, Yarmush ML, Dvorak HF. Spatial distribution of tumor-specific monoclonal antibodies in human melanoma xenografts. Cancer Res. 1992 Jan 15; 52(2):367-76.
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  322. Sung C, Shockley TR, Morrison PF, Dvorak HF, Yarmush ML, Dedrick RL. Predicted and observed effects of antibody affinity and antigen density on monoclonal antibody uptake in solid tumors. Cancer Res. 1992 Jan 15; 52(2):377-84.
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  323. Borel Rinkes IH, Toner M, Sheeha SJ, Tompkins RG, Yarmush ML. Long-term functional recovery of hepatocytes after cryopreservation in a three-dimensional culture configuration. Cell Transplant. 1992; 1(4):281-92.
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  324. Carlson JD, Yarmush ML. Antibody assisted protein refolding. Biotechnology (N Y). 1992 Jan; 10(1):86-91.
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  325. Yarmush ML, Weiss AM, Antonsen KP, Odde DJ, Yarmush DM. Immunoaffinity purification: basic principles and operational considerations. Biotechnol Adv. 1992; 10(3):413-46.
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  326. Busch NA, Yarmush ML. In situ determination of convection and diffusion profiles in heterogeneous media. Adv Exp Med Biol. 1992; 317:629-37.
    View in: PubMed
  327. Rakestraw SL, Ford WE, Tompkins RG, Rodgers MA, Thorpe WP, Yarmush ML. Antibody-targeted photolysis: in vitro immunological, photophysical, and cytotoxic properties of monoclonal antibody-dextran-Sn(IV) chlorin e6 immunoconjugates. Biotechnol Prog. 1992 Jan-Feb; 8(1):30-9.
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  328. Yarmush ML, Dunn JC, Tompkins RG. Assessment of artificial liver support technology. Cell Transplant. 1992; 1(5):323-41.
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  329. Hubel A, Toner M, Cravalho EG, Yarmush ML, Tompkins RG. Intracellular ice formation during the freezing of hepatocytes cultured in a double collagen gel. Biotechnol Prog. 1991 Nov-Dec; 7(6):554-9.
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  330. Murphy RM, Yarmush ML, Colton CK. Determining molecular weight distributions of antigen-antibody complexes by quasi-elastic light scattering. Biopolymers. 1991 Oct; 31(11):1289-95.
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  331. Harris CL, Toner M, Hubel A, Cravalho EG, Yarmush ML, Tompkins RG. Cryopreservation of isolated hepatocytes: intracellular ice formation under various chemical and physical conditions. Cryobiology. 1991 Oct; 28(5):436-44.
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  332. Tompkins RG, Fischman AJ, Yarmush ML. Imaging infections with antibodies. A method to localize occult infections. Chest. 1991 Sep; 100(3 Suppl):169S-172S.
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  333. Dionne KE, Colton CK, Yarmush ML. A microperifusion system with environmental control for studying insulin secretion by pancreatic tissue. Biotechnol Prog. 1991 Jul-Aug; 7(4):359-68.
    View in: PubMed
  334. Dunn JC, Tompkins RG, Yarmush ML. Long-term in vitro function of adult hepatocytes in a collagen sandwich configuration. Biotechnol Prog. 1991 May-Jun; 7(3):237-45.
    View in: PubMed
  335. Antonsen KP, Colton CK, Yarmush ML. Elution conditions and degradation mechanisms in long-term immunoadsorbent use. Biotechnol Prog. 1991 Mar-Apr; 7(2):159-72.
    View in: PubMed
  336. Friedberg JS, Tompkins RG, Rakestraw SL, Warren SW, Fischman AJ, Yarmush ML. Antibody-targeted photolysis. Bacteriocidal effects of Sn (IV) chlorin e6-dextran-monoclonal antibody conjugates. Ann N Y Acad Sci. 1991; 618:383-93.
    View in: PubMed
  337. Shockley TR, Lin K, Nagy JA, Tompkins RG, Dvorak HF, Yarmush ML. Penetration of tumor tissue by antibodies and other immunoproteins. Ann N Y Acad Sci. 1991; 618:367-82.
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  338. Murphy RM, Chamberlin RA, Schurtenberger P, Colton CK, Yarmush ML. Size and structure of antigen-antibody complexes: thermodynamic parameters. Biochemistry. 1990 Dec 11; 29(49):10889-99.
    View in: PubMed
  339. Shockley TR, Mandeville JT, Tompkins RG, Yarmush ML. Equilibrium binding characteristics of monoclonal antibodies recognizing melanoma cell surface antigens. Hybridoma. 1990 Dec; 9(6):527-44.
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  340. Koebe HG, Dunn JC, Toner M, Sterling LM, Hubel A, Cravalho EG, Yarmush ML, Tompkins RG. A new approach to the cryopreservation of hepatocytes in a sandwich culture configuration. Cryobiology. 1990 Oct; 27(5):576-84.
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  341. Morrel EM, Tompkins RG, Fischman AJ, Wilkinson RA, Yarmush ML. Imaging infections with antibodies. A quantitative autoradiographic analysis. J Immunol Methods. 1990 Jun 12; 130(1):39-48.
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  342. Carter EA, Hatz RA, Yarmush ML, Tompkins RG. Injury-induced inhibition of small intestinal protein and nucleic acid synthesis. Gastroenterology. 1990 Jun; 98(6):1445-51.
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  343. Rakestraw SL, Tompkins RG, Yarmush ML. Antibody-targeted photolysis: in vitro studies with Sn(IV) chlorin e6 covalently bound to monoclonal antibodies using a modified dextran carrier. Proc Natl Acad Sci U S A. 1990 Jun; 87(11):4217-21.
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  344. Rakestraw SL, Tompkins RG, Yarmush ML. Preparation and characterization of immunoconjugates for antibody-targeted photolysis. Bioconjug Chem. 1990 May-Jun; 1(3):212-21.
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  345. Shockley TR, Yarmush ML. Growth of tumor cells within microporous hollow fibers: an in vitro model system for studies of immunoprotein transport. Biotechnol Bioeng. 1990 Apr 5; 35(8):843-9.
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  346. Morrell EM, Tompkins RG, Fischman AJ, Wilkinson RA, Burke JF, Rubin RH, Strauss HW, Yarmush ML. Autoradiographic method for quantitation of radiolabeled proteins in tissues using indium-111. J Nucl Med. 1989 Sep; 30(9):1538-45.
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  347. Tompkins RG, Yarmush ML, Schnitzer JJ, Colton CK, Smith KA, Stemerman MB. Low-density lipoprotein transport in blood vessel walls of squirrel monkeys. Am J Physiol. 1989 Aug; 257(2 Pt 2):H452-64.
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  348. Dionne KE, Colton CK, Yarmush ML. Effect of oxygen on isolated pancreatic tissue. ASAIO Trans. 1989 Jul-Sep; 35(3):739-41.
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  349. Tompkins RG, Schnitzer JJ, Yarmush ML. Macromolecular transport within heart valves. Circ Res. 1989 Jun; 64(6):1213-23.
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  350. Olson WC, Spitznagel TM, Yarmush ML. Dissociation kinetics of antigen-antibody interactions: studies on a panel of anti-albumin monoclonal antibodies. Mol Immunol. 1989 Feb; 26(2):129-36.
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  351. Dunn JC, Yarmush ML, Koebe HG, Tompkins RG. Hepatocyte function and extracellular matrix geometry: long-term culture in a sandwich configuration. FASEB J. 1989 Feb; 3(2):174-7.
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  352. Murphy RM, Colton CK, Yarmush ML. Staphylococcal protein A adsorption in neoplastic disease: analysis of physicochemical aspects. Mol Biother. 1989; 1(4):186-207.
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  353. Carter EA, Tompkins RG, Yarmush ML, Walker WA, Burke JF. Redistribution of blood flow after thermal injury and hemorrhagic shock. J Appl Physiol. 1988 Oct; 65(4):1782-8.
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  354. Tompkins RG, Schnitzer JJ, Yarmush ML, Colton CK, Smith KA. Measurement of 125I-low density lipoprotein uptake in selected tissues of the squirrel monkey by quantitative autoradiography. Am J Pathol. 1988 Sep; 132(3):526-42.
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  355. Niebauer GW, Wolf B, Yarmush M, Richardson DW. Evaluation of immune complexes and collagen type-specific antibodies in sera and synovial fluids of horses with secondary osteoarthritis. Am J Vet Res. 1988 Aug; 49(8):1223-7.
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  356. Murphy RM, Slayter H, Schurtenberger P, Chamberlin RA, Colton CK, Yarmush ML. Size and structure of antigen-antibody complexes. Electron microscopy and light scattering studies. Biophys J. 1988 Jul; 54(1):45-56.
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  357. Yarmush ML, Olson WC. Electrophoretic elution from biospecific adsorbents: principles, methodology, and applications. Electrophoresis. 1988 Mar; 9(3):111-20.
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  358. Yarmush DM, Murphy RM, Colton CK, Fisch M, Yarmush ML. Quasi-elastic light scattering of antigen-antibody complexes. Mol Immunol. 1988 Jan; 25(1):17-32.
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  359. Tompkins RG, Carter EA, Carlson JD, Yarmush ML. Enzymatic function of alginate immobilized rat hepatocytes. Biotechnol Bioeng. 1988 Jan; 31(1):11-8.
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  360. Morel GA, Yarmush DM, Colton CK, Benjamin DC, Yarmush ML. Monoclonal antibodies to bovine serum albumin: affinity and specificity determinations. Mol Immunol. 1988 Jan; 25(1):7-15.
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  361. Yarmush DM, Morel G, Yarmush ML. A new technique for mapping epitope specificities of monoclonal antibodies using quasi-elastic light scattering spectroscopy. J Biochem Biophys Methods. 1987 Aug; 14(5):279-89.
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  362. Oseroff AR, Ara G, Ohuoha D, Aprille J, Bommer JC, Yarmush ML, Foley J, Cincotta L. Strategies for selective cancer photochemotherapy: antibody-targeted and selective carcinoma cell photolysis. Photochem Photobiol. 1987 Jul; 46(1):83-96.
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  363. Oseroff AR, Ohuoha D, Hasan T, Bommer JC, Yarmush ML. Antibody-targeted photolysis: selective photodestruction of human T-cell leukemia cells using monoclonal antibody-chlorin e6 conjugates. Proc Natl Acad Sci U S A. 1986 Nov; 83(22):8744-8.
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  364. Wolf B, Yarmush ML. Cosuppression of latent and nominal allotypes in individual rabbit lymphocytes. Immunology. 1985 May; 55(1):65-74.
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  365. Yarmush ML, Gates FT, Dreher KL, Kindt TJ. Serologic and structural characterization of immunoglobulin chains secreted by rabbit-mouse hybridomas. J Immunol. 1981 Jun; 126(6):2240-4.
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  366. Wolf B, Currie EP, Yarmush M. Expression of cell-surface latent allotypes: latent specificities are synthesized only by cells that display the nominal allotype. J Immunol. 1981 Jun; 126(6):2490-3.
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  367. Yarmush ML, Sogn JA, Kern PD, Kindt TJ. Role of immune recognition in latent allotype induction and clearance. Evidence for an allotypic network. J Exp Med. 1981 Jan 1; 153(1):196-206.
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  368. Yarmush ML, Mandy WJ, Kindt TJ. Evidence for linked expression of latent allotypes of the heavy chain constant and variable regions. J Immunol. 1980 Jun; 124(6):2864-9.
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  369. Yarmush ML, Gates FT, Weisfogel DR, Kindt TJ. Identification and characterization of rabbit-mouse hybridomas secreting rabbit immunoglobulin chains. Proc Natl Acad Sci U S A. 1980 May; 77(5):2899-903.
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  370. Yarmush ML, Krutzsch HC, Kindt TJ. Amino acid sequence analysis of immunoglobulin light chains by gas chromatographic-mass spectrometric techniques: structural identity of nominal and latent b9 molecules. Mol Immunol. 1980 Mar; 17(3):319-26.
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  371. Yarmush ML, Sogn JA, Kindt TJ. Latent allotypes: a window to a genetic enigma. Ann Immunol (Paris). 1979 Mar-Apr; 130(2):143-56.
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  372. Mudgett-Hunter M, Yarmush ML, Fraser BA, Kindt TJ. Rabbit latent group a allotypes: characterization and relationship to nominal group a allotypic specificities. J Immunol. 1978 Sep; 121(3):1132-8.
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  373. Yarmush ML, Kindt TJ. Isolation and characterization of IgG molecules expressing latent group b allotypes from pedigreed b4b4 rabbits. J Exp Med. 1978 Aug 1; 148(2):522-33.
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  374. Yarmush ML, Sogn JA, Mudgett M, Kindt TJ. The inheritance of antibody V regions in the rabbit: linkage of an H-chain-specific idiotype to immunoglobulin allotypes. J Exp Med. 1977 Apr 1; 145(4):916-30.
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  375. Sogn JA, Yarmush ML, Kindt TJ. An idiotypic marker for the VL region of an homogeneous antibody. Ann Immunol (Paris). 1976 Jun-Jul; 127(3-4):397-408.
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