 Stephen James O'Brien, Ph.D.
| Title | Adjunct Professor |
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| Institution | Harvard School of Public Health |
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| Department | Immunology and Infectious Diseases |
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| Address | Harvard School of Public Health
Bldg 1, Rm 702
665 Huntington Ave
Boston MA 02115
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 Bibliographic
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications.
Faculty can login to make corrections and additions.
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Sezgin E, Hendrickson SL, Jabs DA, Van Natta ML, Lewis RA, Troyer JL, O'Brien SJ. Effect of host genetics on incidence of HIV neuroretinal disorder in patients with AIDS. J Acquir Immune Defic Syndr. 2010 Aug; 54(4):343-51.
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Hendrickson SL, Jabs DA, Van Natta M, Lewis RA, Wallace DC, O'Brien SJ. Mitochondrial haplogroups are associated with risk of neuroretinal disorder in HIV-positive patients. J Acquir Immune Defic Syndr. 2010 Apr 1; 53(4):451-5.
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Herbeck JT, Gottlieb GS, Winkler CA, Nelson GW, An P, Maust BS, Wong KG, Troyer JL, Goedert JJ, Kessing BD, Detels R, Wolinsky SM, Martinson J, Buchbinder S, Kirk GD, Jacobson LP, Margolick JB, Kaslow RA, O'Brien SJ, Mullins JI. Multistage genomewide association study identifies a locus at 1q41 associated with rate of HIV-1 disease progression to clinical AIDS. J Infect Dis. 2010 Feb 15; 201(4):618-26.
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Eizirik E, Murphy WJ, Koepfli KP, Johnson WE, Dragoo JW, Wayne RK, O'Brien SJ. Pattern and timing of diversification of the mammalian order Carnivora inferred from multiple nuclear gene sequences. Mol Phylogenet Evol. 2010 Jul; 56(1):49-63.
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Tang M, Zeng Y, Poisson A, Marti D, Guan L, Zheng Y, Deng H, Liao J, Guo X, Sun S, Nelson G, de Thé G, Winkler CA, O'Brien SJ, Carrington M, Gao X. Haplotype-dependent HLA susceptibility to nasopharyngeal carcinoma in a Southern Chinese population. Genes Immun. 2010 Jun; 11(4):334-42.
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Oleksyk TK, Smith MW, O'Brien SJ. Genome-wide scans for footprints of natural selection. Philos Trans R Soc Lond B Biol Sci. 2010 Jan 12; 365(1537):185-205.
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Menotti-Raymond M, Deckman KH, David V, Myrkalo J, O'Brien SJ, Narfström K. Mutation discovered in a feline model of human congenital retinal blinding disease. Invest Ophthalmol Vis Sci. 2010 Jun; 51(6):2852-9.
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Drakos MC, Hillstrom H, Voos JE, Miller AN, Kraszewski AP, Wickiewicz TL, Warren RF, Allen AA, O'Brien SJ. The effect of the shoe-surface interface in the development of anterior cruciate ligament strain. J Biomech Eng. 2010 Jan; 132(1):011003.
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Fellay J, Ge D, Shianna KV, Colombo S, Ledergerber B, Cirulli ET, Urban TJ, Zhang K, Gumbs CE, Smith JP, Castagna A, Cozzi-Lepri A, De Luca A, Easterbrook P, Günthard HF, Mallal S, Mussini C, Dalmau J, Martinez-Picado J, Miro JM, Obel N, Wolinsky SM, Martinson JJ, Detels R, Margolick JB, Jacobson LP, Descombes P, Antonarakis SE, Beckmann JS, O'Brien SJ, Letvin NL, McMichael AJ, Haynes BF, Carrington M, Feng S, Telenti A, Goldstein DB. Common genetic variation and the control of HIV-1 in humans. PLoS Genet. 2009 Dec; 5(12):e1000791.
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Eizirik E, David VA, Buckley-Beason V, Roelke ME, Schäffer AA, Hannah SS, Narfström K, O'Brien SJ, Menotti-Raymond M. Defining and mapping mammalian coat pattern genes: multiple genomic regions implicated in domestic cat stripes and spots. Genetics. 2010 Jan; 184(1):267-75.
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Brown MA, Munkhtsog B, Troyer JL, Ross S, Sellers R, Fine AE, Swanson WF, Roelke ME, O'Brien SJ. Feline immunodeficiency virus (FIV) in wild Pallas' cats. Vet Immunol Immunopathol. 2010 Mar 15; 134(1-2):90-5.
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Urban TJ, Weintrob AC, Fellay J, Colombo S, Shianna KV, Gumbs C, Rotger M, Pelak K, Dang KK, Detels R, Martinson JJ, O'Brien SJ, Letvin NL, McMichael AJ, Haynes BF, Carrington M, Telenti A, Michael NL, Goldstein DB. CCL3L1 and HIV/AIDS susceptibility. Nat Med. 2009 Oct; 15(10):1110-2.
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Brown MA, Troyer JL, Pecon-Slattery J, Roelke ME, O'Brien SJ. Genetics and pathogenesis of feline infectious peritonitis virus. Emerg Infect Dis. 2009 Sep; 15(9):1445-52.
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Narfström K, David V, Jarret O, Beatty J, Barrs V, Wilkie D, O'Brien S, Menotti-Raymond M. Retinal degeneration in the Abyssinian and Somali cat (rdAc): correlation between genotype and phenotype and rdAc allele frequency in two continents. Vet Ophthalmol. 2009 Sep-Oct; 12(5):285-91.
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Lewin HA, Larkin DM, Pontius J, O'Brien SJ. Every genome sequence needs a good map. Genome Res. 2009 Nov; 19(11):1925-8.
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O'Brien S, Healy B, Negredo C, Fanning S, Iversen C. Evaluation of a new one-step enrichment in conjunction with a chromogenic medium for the detection of Cronobacter spp. (Enterobacter sakazakii) in powdered infant formula. J Food Prot. 2009 Jul; 72(7):1472-5.
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Pontius JU, O'Brien SJ. Artifacts of the 1.9x feline genome assembly derived from the feline-specific satellite sequence. J Hered. 2009 Jul-Aug; 100 Suppl 1:S14-8.
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Driscoll CA, Macdonald DW, O'Brien SJ. From wild animals to domestic pets, an evolutionary view of domestication. Proc Natl Acad Sci U S A. 2009 Jun 16; 106 Suppl 1:9971-8.
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Guo X, Johnson RC, Deng H, Liao J, Guan L, Nelson GW, Tang M, Zheng Y, de The G, O'Brien SJ, Winkler CA, Zeng Y. Evaluation of nonviral risk factors for nasopharyngeal carcinoma in a high-risk population of Southern China. Int J Cancer. 2009 Jun 15; 124(12):2942-7.
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Hendrickson SL, Kingsley LA, Ruiz-Pesini E, Poole JC, Jacobson LP, Palella FJ, Bream JH, Wallace DC, O'Brien SJ. Mitochondrial DNA haplogroups influence lipoatrophy after highly active antiretroviral therapy. J Acquir Immune Defic Syndr. 2009 Jun 1; 51(2):111-6.
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Driscoll CA, Clutton-Brock J, Kitchener AC, O'Brien SJ. The Taming of the cat. Genetic and archaeological findings hint that wildcats became housecats earlier--and in a different place--than previously thought. Sci Am. 2009 Jun; 300(6):68-75.
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Roelke ME, Brown MA, Troyer JL, Winterbach H, Winterbach C, Hemson G, Smith D, Johnson RC, Pecon-Slattery J, Roca AL, Alexander KA, Klein L, Martelli P, Krishnasamy K, O'Brien SJ. Pathological manifestations of feline immunodeficiency virus (FIV) infection in wild African lions. Virology. 2009 Jul 20; 390(1):1-12.
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Menotti-Raymond M, David VA, Eizirik E, Roelke ME, Ghaffari H, O'Brien SJ. Mapping of the domestic cat "SILVER" coat color locus identifies a unique genomic location for silver in mammals. J Hered. 2009 Jul-Aug; 100 Suppl 1:S8-13.
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Li X, Glaser D, Li W, Johnson WE, O'Brien SJ, Beauchamp GK, Brand JG. Analyses of sweet receptor gene (Tas1r2) and preference for sweet stimuli in species of Carnivora. J Hered. 2009 Jul-Aug; 100 Suppl 1:S90-100.
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Oleksyk TK, Shrestha S, Truelove AL, Goedert JJ, Donfield SM, Phair J, Mehta S, O'Brien SJ, Smith MW. Extended IL10 haplotypes and their association with HIV progression to AIDS. Genes Immun. 2009 Jun; 10(4):309-22.
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O'Brien S, Healy B, Negredo C, Anderson W, Fanning S, Iversen C. Prevalence of Cronobacter species (Enterobacter sakazakii) in follow-on infant formulae and infant drinks. Lett Appl Microbiol. 2009 May; 48(5):536-41.
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Schmidt-Küntzel A, Nelson G, David VA, Schäffer AA, Eizirik E, Roelke ME, Kehler JS, Hannah SS, O'Brien SJ, Menotti-Raymond M. A domestic cat X chromosome linkage map and the sex-linked orange locus: mapping of orange, multiple origins and epistasis over nonagouti. Genetics. 2009 Apr; 181(4):1415-25.
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Sezgin E, Lind JM, Shrestha S, Hendrickson S, Goedert JJ, Donfield S, Kirk GD, Phair JP, Troyer JL, O'Brien SJ, Smith MW. Association of Y chromosome haplogroup I with HIV progression, and HAART outcome. Hum Genet. 2009 Apr; 125(3):281-94.
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Driscoll CA, Yamaguchi N, Bar-Gal GK, Roca AL, Luo S, Macdonald DW, O'Brien SJ. Mitochondrial phylogeography illuminates the origin of the extinct caspian tiger and its relationship to the amur tiger. PLoS One. 2009; 4(1):e4125.
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O'Brien SJ. Comparative genomics in vertebrates: a role for the platypus. Introduction. Reprod Fertil Dev. 2009; 21(8):vii-ix.
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O'Brien SJ. Stewardship of human biospecimens, DNA, genotype, and clinical data in the GWAS era. Annu Rev Genomics Hum Genet. 2009; 10:193-209.
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Menotti-Raymond M, David VA, Schäffer AA, Tomlin JF, Eizirik E, Phillip C, Wells D, Pontius JU, Hannah SS, O'Brien SJ. An autosomal genetic linkage map of the domestic cat, Felis silvestris catus. Genomics. 2009 Apr; 93(4):305-13.
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Hendrickson SL, Hutcheson HB, Ruiz-Pesini E, Poole JC, Lautenberger J, Sezgin E, Kingsley L, Goedert JJ, Vlahov D, Donfield S, Wallace DC, O'Brien SJ. Mitochondrial DNA haplogroups influence AIDS progression. AIDS. 2008 Nov 30; 22(18):2429-39.
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Perelman PL, Graphodatsky AS, Dragoo JW, Serdyukova NA, Stone G, Cavagna P, Menotti A, Nie W, O'Brien PC, Wang J, Burkett S, Yuki K, Roelke ME, O'Brien SJ, Yang F, Stanyon R. Chromosome painting shows that skunks (Mephitidae, Carnivora) have highly rearranged karyotypes. Chromosome Res. 2008; 16(8):1215-31.
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Antunes A, Troyer JL, Roelke ME, Pecon-Slattery J, Packer C, Winterbach C, Winterbach H, Hemson G, Frank L, Stander P, Siefert L, Driciru M, Funston PJ, Alexander KA, Prager KC, Mills G, Wildt D, Bush M, O'Brien SJ, Johnson WE. The evolutionary dynamics of the lion Panthera leo revealed by host and viral population genomics. PLoS Genet. 2008 Nov; 4(11):e1000251.
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LaRue RS, Andrésdóttir V, Blanchard Y, Conticello SG, Derse D, Emerman M, Greene WC, Jónsson SR, Landau NR, Löchelt M, Malik HS, Malim MH, Münk C, O'Brien SJ, Pathak VK, Strebel K, Wain-Hobson S, Yu XF, Yuhki N, Harris RS. Guidelines for naming nonprimate APOBEC3 genes and proteins. J Virol. 2009 Jan; 83(2):494-7.
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Trigo TC, Freitas TR, Kunzler G, Cardoso L, Silva JC, Johnson WE, O'Brien SJ, Bonatto SL, Eizirik E. Inter-species hybridization among Neotropical cats of the genus Leopardus, and evidence for an introgressive hybrid zone between L. geoffroyi and L. tigrinus in southern Brazil. Mol Ecol. 2008 Oct; 17(19):4317-33.
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Bennett D, Humphreys L, O'Brien S, Orr J, Beverland DE. Temporospatial parameters of hip replacement patients ten years post-operatively. Int Orthop. 2009 Oct; 33(5):1203-7.
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Krause J, Unger T, Noçon A, Malaspinas AS, Kolokotronis SO, Stiller M, Soibelzon L, Spriggs H, Dear PH, Briggs AW, Bray SC, O'Brien SJ, Rabeder G, Matheus P, Cooper A, Slatkin M, Pääbo S, Hofreiter M. Mitochondrial genomes reveal an explosive radiation of extinct and extant bears near the Miocene-Pliocene boundary. BMC Evol Biol. 2008; 8:220.
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Yuhki N, Mullikin JC, Beck T, Stephens R, O'Brien SJ. Sequences, annotation and single nucleotide polymorphism of the major histocompatibility complex in the domestic cat. PLoS One. 2008; 3(7):e2674.
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Hendrickson SL, Jacobson LP, Nelson GW, Phair JP, Lautenberger J, Johnson RC, Kingsley L, Margolick JB, Detels R, Goedert JJ, O'Brien SJ. Host genetic influences on highly active antiretroviral therapy efficacy and AIDS-free survival. J Acquir Immune Defic Syndr. 2008 Jul 1; 48(3):263-71.
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Guo X, O'Brien SJ, Zeng Y, Nelson GW, Winkler CA. GSTM1 and GSTT1 gene deletions and the risk for nasopharyngeal carcinoma in Han Chinese. Cancer Epidemiol Biomarkers Prev. 2008 Jul; 17(7):1760-3.
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Cunningham MW, Brown MA, Shindle DB, Terrell SP, Hayes KA, Ferree BC, McBride RT, Blankenship EL, Jansen D, Citino SB, Roelke ME, Kiltie RA, Troyer JL, O'Brien SJ. Epizootiology and management of feline leukemia virus in the Florida puma. J Wildl Dis. 2008 Jul; 44(3):537-52.
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O'Brien SJ. The platypus genome unraveled. Cell. 2008 Jun 13; 133(6):953-5.
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O'Brien SJ, Johnson W, Driscoll C, Pontius J, Pecon-Slattery J, Menotti-Raymond M. State of cat genomics. Trends Genet. 2008 Jun; 24(6):268-79.
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Truelove AL, Oleksyk TK, Shrestha S, Thio CL, Goedert JJ, Donfield SM, Kirk GD, Thomas DL, O'Brien SJ, Smith MW. Evaluation of IL10, IL19 and IL20 gene polymorphisms and chronic hepatitis B infection outcome. Int J Immunogenet. 2008 Jun; 35(3):255-64.
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Chen Z, O'Brien S. Structure direction of II-VI semiconductor quantum dot binary nanoparticle superlattices by tuning radius ratio. ACS Nano. 2008 Jun; 2(6):1219-29.
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Luo SJ, Johnson WE, Martenson J, Antunes A, Martelli P, Uphyrkina O, Traylor-Holzer K, Smith JL, O'Brien SJ. Subspecies genetic assignments of worldwide captive tigers increase conservation value of captive populations. Curr Biol. 2008 Apr 22; 18(8):592-6.
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Nash WG, Menninger JC, Padilla-Nash HM, Stone G, Perelman PL, O'Brien SJ. The ancestral carnivore karyotype (2n = 38) lives today in ringtails. J Hered. 2008 May-Jun; 99(3):241-53.
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Oleksyk TK, Zhao K, De La Vega FM, Gilbert DA, O'Brien SJ, Smith MW. Identifying selected regions from heterozygosity and divergence using a light-coverage genomic dataset from two human populations. PLoS One. 2008; 3(3):e1712.
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da Fonseca RR, Johnson WE, O'Brien SJ, Ramos MJ, Antunes A. The adaptive evolution of the mammalian mitochondrial genome. BMC Genomics. 2008; 9:119.
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Münk C, Beck T, Zielonka J, Hotz-Wagenblatt A, Chareza S, Battenberg M, Thielebein J, Cichutek K, Bravo IG, O'Brien SJ, Löchelt M, Yuhki N. Functions, structure, and read-through alternative splicing of feline APOBEC3 genes. Genome Biol. 2008; 9(3):R48.
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Hultman KL, Raffo AJ, Grzenda AL, Harris PE, Brown TR, O'Brien S. Magnetic resonance imaging of major histocompatibility class II expression in the renal medulla using immunotargeted superparamagnetic iron oxide nanoparticles. ACS Nano. 2008 Mar; 2(3):477-84.
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Pecon-Slattery J, McCracken CL, Troyer JL, VandeWoude S, Roelke M, Sondgeroth K, Winterbach C, Winterbach H, O'Brien SJ. Genomic organization, sequence divergence, and recombination of feline immunodeficiency virus from lions in the wild. BMC Genomics. 2008; 9:66.
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Brown MA, Cunningham MW, Roca AL, Troyer JL, Johnson WE, O'Brien SJ. Genetic characterization of feline leukemia virus from Florida panthers. Emerg Infect Dis. 2008 Feb; 14(2):252-9.
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Hutcheson HB, Lautenberger JA, Nelson GW, Pontius JU, Kessing BD, Winkler CA, Smith MW, Johnson R, Stephens R, Phair J, Goedert JJ, Donfield S, O'Brien SJ. Detecting AIDS restriction genes: from candidate genes to genome-wide association discovery. Vaccine. 2008 Jun 6; 26(24):2951-65.
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Troyer JL, Vandewoude S, Pecon-Slattery J, McIntosh C, Franklin S, Antunes A, Johnson W, O'Brien SJ. FIV cross-species transmission: an evolutionary prospective. Vet Immunol Immunopathol. 2008 May 15; 123(1-2):159-66.
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Pecon-Slattery J, Troyer JL, Johnson WE, O'Brien SJ. Evolution of feline immunodeficiency virus in Felidae: implications for human health and wildlife ecology. Vet Immunol Immunopathol. 2008 May 15; 123(1-2):32-44.
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Zeng Z, Guan L, An P, Sun S, O'Brien SJ, Winkler CA. A population-based study to investigate host genetic factors associated with hepatitis B infection and pathogenesis in the Chinese population. BMC Infect Dis. 2008; 8:1.
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Napolitano C, Bennett M, Johnson WE, O'Brien SJ, Marquet PA, Barría I, Poulin E, Iriarte A. Ecological and biogeographical inferences on two sympatric and enigmatic Andean cat species using genetic identification of faecal samples. Mol Ecol. 2008 Jan; 17(2):678-90.
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Graphodatsky AS, Perelman PL, Sokolovskaya NV, Beklemisheva VR, Serdukova NA, Dobigny G, O'Brien SJ, Ferguson-Smith MA, Yang F. Phylogenomics of the dog and fox family (Canidae, Carnivora) revealed by chromosome painting. Chromosome Res. 2008; 16(1):129-43.
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McConway J, O'Brien S, Doran E, Archbold P, Beverland D. The use of a posterior lip augmentation device for a revision of recurrent dislocation after primary cemented Charnley/Charnley Elite total hip replacement: results at a mean follow-up of six years and nine months. J Bone Joint Surg Br. 2007 Dec; 89(12):1581-5.
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Chen Z, Moore J, Radtke G, Sirringhaus H, O'Brien S. Binary nanoparticle superlattices in the semiconductor-semiconductor system: CdTe and CdSe. J Am Chem Soc. 2007 Dec 19; 129(50):15702-9.
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Drakos MC, Verma NN, Gulotta LV, Potucek F, Taylor S, Fealy S, Selby RM, O'Brien SJ. Arthroscopic transfer of the long head of the biceps tendon: functional outcome and clinical results. Arthroscopy. 2008 Feb; 24(2):217-23.
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Marker LL, Pearks Wilkerson AJ, Sarno RJ, Martenson J, Breitenmoser-Würsten C, O'Brien SJ, Johnson WE. Molecular genetic insights on cheetah (Acinonyx jubatus) ecology and conservation in Namibia. J Hered. 2008 Jan-Feb; 99(1):2-13.
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Pontius JU, Mullikin JC, Smith DR. Initial sequence and comparative analysis of the cat genome. Genome Res. 2007 Nov; 17(11):1675-89.
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Menotti-Raymond M, David VA, Pflueger SM, Lindblad-Toh K, Wade CM, O'Brien SJ, Johnson WE. Patterns of molecular genetic variation among cat breeds. Genomics. 2008 Jan; 91(1):1-11.
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Battaglia MJ, Cordasco FA, Hannafin JA, Rodeo SA, O'Brien SJ, Altchek DW, Cavanaugh J, Wickiewicz TL, Warren RF. Results of revision anterior cruciate ligament surgery. Am J Sports Med. 2007 Dec; 35(12):2057-66.
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Nicholl BI, Halder SL, Macfarlane GJ, Thompson DG, O'Brien S, Musleh M, McBeth J. Psychosocial risk markers for new onset irritable bowel syndrome--results of a large prospective population-based study. Pain. 2008 Jul; 137(1):147-55.
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Kehler JS, David VA, Schäffer AA, Bajema K, Eizirik E, Ryugo DK, Hannah SS, O'Brien SJ, Menotti-Raymond M. Four independent mutations in the feline fibroblast growth factor 5 gene determine the long-haired phenotype in domestic cats. J Hered. 2007 Sep-Oct; 98(6):555-66.
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Martin MP, Pascal V, Yeager M, Phair J, Kirk GD, Hoots K, O'Brien SJ, Anderson SK, Carrington M. A mutation in KIR3DS1 that results in truncation and lack of cell surface expression. Immunogenetics. 2007 Oct; 59(10):823-9.
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Yuhki N, Beck T, Stephens R, Neelam B, O'Brien SJ. Comparative genomic structure of human, dog, and cat MHC: HLA, DLA, and FLA. J Hered. 2007; 98(5):390-9.
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Coomber N, David VA, O'Brien SJ, Menotti-Raymond M. Validation of a short tandem repeat multiplex typing system for genetic individualization of domestic cat samples. Croat Med J. 2007 Aug; 48(4):547-55.
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Springer MS, Burk-Herrick A, Meredith R, Eizirik E, Teeling E, O'Brien SJ, Murphy WJ. The adequacy of morphology for reconstructing the early history of placental mammals. Syst Biol. 2007 Aug; 56(4):673-84.
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Antunes A, Pontius J, Ramos MJ, O'Brien SJ, Johnson WE. Mitochondrial introgressions into the nuclear genome of the domestic cat. J Hered. 2007; 98(5):414-20.
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Pontius JU, O'Brien SJ. Genome Annotation Resource Fields--GARFIELD: a genome browser for Felis catus. J Hered. 2007; 98(5):386-9.
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Luo SJ, Johnson WE, David VA, Menotti-Raymond M, Stanyon R, Cai QX, Beck T, Yuhki N, Pecon-Slattery J, Smith JL, O'Brien SJ. Development of Y chromosome intraspecific polymorphic markers in the Felidae. J Hered. 2007; 98(5):400-13.
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Baena A, Mootnick AR, Falvo JV, Tsytskova AV, Ligeiro F, Diop OM, Brieva C, Gagneux P, O'Brien SJ, Ryder OA, Goldfeld AE. Primate TNF promoters reveal markers of phylogeny and evolution of innate immunity. PLoS One. 2007; 2(7):e621.
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O'Brien SJ, Johnson WE. The evolution of cats. Genomic paw prints in the DNA of the world's wild cats have clarified the cat family tree and uncovered several remarkable migrations in their past. Sci Am. 2007 Jul; 297(1):68-75.
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Driscoll CA, Menotti-Raymond M, Roca AL, Hupe K, Johnson WE, Geffen E, Harley EH, Delibes M, Pontier D, Kitchener AC, Yamaguchi N, O'brien SJ, Macdonald DW. The Near Eastern origin of cat domestication. Science. 2007 Jul 27; 317(5837):519-23.
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Vàzquez-Salat N, Yuhki N, Beck T, O'Brien SJ, Murphy WJ. Gene conversion between mammalian CCR2 and CCR5 chemokine receptor genes: a potential mechanism for receptor dimerization. Genomics. 2007 Aug; 90(2):213-24.
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An P, Wang LH, Hutcheson-Dilks H, Nelson G, Donfield S, Goedert JJ, Rinaldo CR, Buchbinder S, Kirk GD, O'Brien SJ, Winkler CA. Regulatory polymorphisms in the cyclophilin A gene, PPIA, accelerate progression to AIDS. PLoS Pathog. 2007 Jun; 3(6):e88.
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Wilting A, Buckley-Beason VA, Feldhaar H, Gadau J, O'brien SJ, Linsenmair KE. Clouded leopard phylogeny revisited: support for species recognition and population division between Borneo and Sumatra. Front Zool. 2007; 4:15.
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Menotti-Raymond M, David VA, Schäffer AA, Stephens R, Wells D, Kumar-Singh R, O'Brien SJ, Narfström K. Mutation in CEP290 discovered for cat model of human retinal degeneration. J Hered. 2007 May-Jun; 98(3):211-20.
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Martin MP, Qi Y, Gao X, Yamada E, Martin JN, Pereyra F, Colombo S, Brown EE, Shupert WL, Phair J, Goedert JJ, Buchbinder S, Kirk GD, Telenti A, Connors M, O'Brien SJ, Walker BD, Parham P, Deeks SG, McVicar DW, Carrington M. Innate partnership of HLA-B and KIR3DL1 subtypes against HIV-1. Nat Genet. 2007 Jun; 39(6):733-40.
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Miller-Butterworth CM, Murphy WJ, O'Brien SJ, Jacobs DS, Springer MS, Teeling EC. A family matter: conclusive resolution of the taxonomic position of the long-fingered bats, miniopterus. Mol Biol Evol. 2007 Jul; 24(7):1553-61.
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Guo X, Whalley A, Klare JE, Huang L, O'brien S, Steigerwald M, Nuckolls C. Single-molecule devices as scaffolding for multicomponent nanostructure assembly. Nano Lett. 2007 May; 7(5):1119-22.
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O'Brien SJ. Q&A: Stephen J. O'Brien. Curr Biol. 2007 Mar 6; 17(5):R152-4.
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King V, Goodfellow PN, Pearks Wilkerson AJ, Johnson WE, O'Brien SJ, Pecon-Slattery J. Evolution of the male-determining gene SRY within the cat family Felidae. Genetics. 2007 Apr; 175(4):1855-67.
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Coleman SH, Cohen DB, Drakos MC, Allen AA, Williams RJ, O'brien SJ, Altchek DW, Warren RF. Arthroscopic repair of type II superior labral anterior posterior lesions with and without acromioplasty: a clinical analysis of 50 patients. Am J Sports Med. 2007 May; 35(5):749-53.
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An P, Duggal P, Wang LH, O'Brien SJ, Donfield S, Goedert JJ, Phair J, Buchbinder S, Kirk GD, Winkler CA. Polymorphisms of CUL5 are associated with CD4+ T cell loss in HIV-1 infected individuals. PLoS Genet. 2007 Jan 26; 3(1):e19.
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Welzel TM, Gao X, Pfeiffer RM, Martin MP, O'Brien SJ, Goedert JJ, Carrington M, O'Brien TR. HLA-B Bw4 alleles and HIV-1 transmission in heterosexual couples. AIDS. 2007 Jan 11; 21(2):225-9.
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Murphy WJ, O'Brien SJ. Designing and optimizing comparative anchor primers for comparative gene mapping and phylogenetic inference. Nat Protoc. 2007; 2(11):3022-30.
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Buckley-Beason VA, Johnson WE, Nash WG, Stanyon R, Menninger JC, Driscoll CA, Howard J, Bush M, Page JE, Roelke ME, Stone G, Martelli PP, Wen C, Ling L, Duraisingam RK, Lam PV, O'Brien SJ. Molecular evidence for species-level distinctions in clouded leopards. Curr Biol. 2006 Dec 5; 16(23):2371-6.
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Zahariadis G, Plitt SS, O'Brien S, Yi QL, Fan W, Preiksaitis JK. Prevalence and estimated incidence of blood-borne viral pathogen infection in organ and tissue donors from northern Alberta. Am J Transplant. 2007 Jan; 7(1):226-34.
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Thio CL, Astemborski J, Bashirova A, Mosbruger T, Greer S, Witt MD, Goedert JJ, Hilgartner M, Majeske A, O'Brien SJ, Thomas DL, Carrington M. Genetic protection against hepatitis B virus conferred by CCR5Delta32: Evidence that CCR5 contributes to viral persistence. J Virol. 2007 Jan; 81(2):441-5.
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Lind JM, Hutcheson-Dilks HB, Williams SM, Moore JH, Essex M, Ruiz-Pesini E, Wallace DC, Tishkoff SA, O'Brien SJ, Smith MW. Elevated male European and female African contributions to the genomes of African American individuals. Hum Genet. 2007 Jan; 120(5):713-22.
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Murphy WJ, Davis B, David VA, Agarwala R, Schäffer AA, Pearks Wilkerson AJ, Neelam B, O'Brien SJ, Menotti-Raymond M. A 1.5-Mb-resolution radiation hybrid map of the cat genome and comparative analysis with the canine and human genomes. Genomics. 2007 Feb; 89(2):189-96.
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Fyfe JC, Menotti-Raymond M, David VA, Brichta L, Schäffer AA, Agarwala R, Murphy WJ, Wedemeyer WJ, Gregory BL, Buzzell BG, Drummond MC, Wirth B, O'Brien SJ. An approximately 140-kb deletion associated with feline spinal muscular atrophy implies an essential LIX1 function for motor neuron survival. Genome Res. 2006 Sep; 16(9):1084-90.
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Javanbakht H, An P, Gold B, Petersen DC, O'Huigin C, Nelson GW, O'Brien SJ, Kirk GD, Detels R, Buchbinder S, Donfield S, Shulenin S, Song B, Perron MJ, Stremlau M, Sodroski J, Dean M, Winkler C. Effects of human TRIM5alpha polymorphisms on antiretroviral function and susceptibility to human immunodeficiency virus infection. Virology. 2006 Oct 10; 354(1):15-27.
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Qi Y, Martin MP, Gao X, Jacobson L, Goedert JJ, Buchbinder S, Kirk GD, O'Brien SJ, Trowsdale J, Carrington M. KIR/HLA pleiotropism: protection against both HIV and opportunistic infections. PLoS Pathog. 2006 Aug; 2(8):e79.
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Ishida Y, David VA, Eizirik E, Schäffer AA, Neelam BA, Roelke ME, Hannah SS, O'brien SJ, Menotti-Raymond M. A homozygous single-base deletion in MLPH causes the dilute coat color phenotype in the domestic cat. Genomics. 2006 Dec; 88(6):698-705.
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Jabbour E, Kantarjian H, Jones D, Talpaz M, Bekele N, O'Brien S, Zhou X, Luthra R, Garcia-Manero G, Giles F, Rios MB, Verstovsek S, Cortes J. Frequency and clinical significance of BCR-ABL mutations in patients with chronic myeloid leukemia treated with imatinib mesylate. Leukemia. 2006 Oct; 20(10):1767-73.
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Guo XC, O'Brien SJ, Winkler C, Scott K, Hutcheson H, David V, Kessing B, Zheng YM, Liao J, Lui Y, Guy de T, Zeng Y. [Association study of chromosome 4 STRs polymorphisms with nasopharyngeal carcinoma]. Yi Chuan. 2006 Jul; 28(7):783-90.
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Bashirova AA, Bleiber G, Qi Y, Hutcheson H, Yamashita T, Johnson RC, Cheng J, Alter G, Goedert JJ, Buchbinder S, Hoots K, Vlahov D, May M, Maldarelli F, Jacobson L, O'brien SJ, Telenti A, Carrington M. Consistent effects of TSG101 genetic variability on multiple outcomes of exposure to human immunodeficiency virus type 1. J Virol. 2006 Jul; 80(14):6757-63.
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Nelson GW, O'Brien SJ. Using mutual information to measure the impact of multiple genetic factors on AIDS. J Acquir Immune Defic Syndr. 2006 Jul; 42(3):347-54.
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Guo XC, Scott K, Liu Y, Dean M, David V, Nelson GW, Johnson RC, Dilks HH, Lautenberger J, Kessing B, Martenson J, Guan L, Sun S, Deng H, Zheng Y, de The G, Liao J, Zeng Y, O'Brien SJ, Winkler CA. Genetic factors leading to chronic Epstein-Barr virus infection and nasopharyngeal carcinoma in South East China: study design, methods and feasibility. Hum Genomics. 2006 Jun; 2(6):365-75.
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Modi WS, Lautenberger J, An P, Scott K, Goedert JJ, Kirk GD, Buchbinder S, Phair J, Donfield S, O'Brien SJ, Winkler C. Genetic variation in the CCL18-CCL3-CCL4 chemokine gene cluster influences HIV Type 1 transmission and AIDS disease progression. Am J Hum Genet. 2006 Jul; 79(1):120-8.
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Capelli C, MacPhee RD, Roca AL, Brisighelli F, Georgiadis N, O'Brien SJ, Greenwood AD. A nuclear DNA phylogeny of the woolly mammoth (Mammuthus primigenius). Mol Phylogenet Evol. 2006 Aug; 40(2):620-7.
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Wang F, Sfeir MY, Huang L, Huang XM, Wu Y, Kim J, Hone J, O'Brien S, Brus LE, Heinz TF. Interactions between individual carbon nanotubes studied by Rayleigh scattering spectroscopy. Phys Rev Lett. 2006 Apr 28; 96(16):167401.
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Sfeir MY, Beetz T, Wang F, Huang L, Huang XM, Huang M, Hone J, O'Brien S, Misewich JA, Heinz TF, Wu L, Zhu Y, Brus LE. Optical spectroscopy of individual single-walled carbon nanotubes of defined chiral structure. Science. 2006 Apr 28; 312(5773):554-6.
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Roelke ME, Pecon-Slattery J, Taylor S, Citino S, Brown E, Packer C, Vandewoude S, O'Brien SJ. T-lymphocyte profiles in FIV-infected wild lions and pumas reveal CD4 depletion. J Wildl Dis. 2006 Apr; 42(2):234-48.
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Gao X, Single RM, Karacki P, Marti D, O'Brien SJ, Carrington M. Diversity of MICA and linkage disequilibrium with HLA-B in two North American populations. Hum Immunol. 2006 Mar; 67(3):152-8.
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Baker CS, Vant MD, Dalebout ML, Lento GM, O'Brien SJ, Yuhki N. Diversity and duplication of DQB and DRB-like genes of the MHC in baleen whales (suborder: Mysticeti). Immunogenetics. 2006 May; 58(4):283-96.
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Tam CC, Rodrigues LC, O'Brien SJ, Hajat S. Temperature dependence of reported Campylobacter infection in England, 1989-1999. Epidemiol Infect. 2006 Feb; 134(1):119-25.
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Cohen DB, Coleman S, Drakos MC, Allen AA, O'Brien SJ, Altchek DW, Warren RF. Outcomes of isolated type II SLAP lesions treated with arthroscopic fixation using a bioabsorbable tack. Arthroscopy. 2006 Feb; 22(2):136-42.
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Guo X, Small JP, Klare JE, Wang Y, Purewal MS, Tam IW, Hong BH, Caldwell R, Huang L, O'brien S, Yan J, Breslow R, Wind SJ, Hone J, Kim P, Nuckolls C. Covalently bridging gaps in single-walled carbon nanotubes with conducting molecules. Science. 2006 Jan 20; 311(5759):356-9.
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Johnson WE, Eizirik E, Pecon-Slattery J, Murphy WJ, Antunes A, Teeling E, O'Brien SJ. The late Miocene radiation of modern Felidae: a genetic assessment. Science. 2006 Jan 6; 311(5757):73-7.
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Kim JH, Antunes A, Luo SJ, Menninger J, Nash WG, O'Brien SJ, Johnson WE. Evolutionary analysis of a large mtDNA translocation (numt) into the nuclear genome of the Panthera genus species. Gene. 2006 Feb 1; 366(2):292-302.
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Walsh EC, Sabeti P, Hutcheson HB, Fry B, Schaffner SF, de Bakker PI, Varilly P, Palma AA, Roy J, Cooper R, Winkler C, Zeng Y, de The G, Lander ES, O'Brien S, Altshuler D. Searching for signals of evolutionary selection in 168 genes related to immune function. Hum Genet. 2006 Mar; 119(1-2):92-102.
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Modi WS, Scott K, Goedert JJ, Vlahov D, Buchbinder S, Detels R, Donfield S, O'brien SJ, Winkler C. Haplotype analysis of the SDF-1 (CXCL12) gene in a longitudinal HIV-1/AIDS cohort study. Genes Immun. 2005 Dec; 6(8):691-8.
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Shrestha S, Strathdee SA, Galai N, Oleksyk T, Fallin MD, Mehta S, Schaid D, Vlahov D, O'Brien SJ, Smith MW. Behavioral risk exposure and host genetics of susceptibility to HIV-1 infection. J Infect Dis. 2006 Jan 1; 193(1):16-26.
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Gao X, Bashirova A, Iversen AK, Phair J, Goedert JJ, Buchbinder S, Hoots K, Vlahov D, Altfeld M, O'Brien SJ, Carrington M. AIDS restriction HLA allotypes target distinct intervals of HIV-1 pathogenesis. Nat Med. 2005 Dec; 11(12):1290-2.
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Helgadottir A, Manolescu A, Helgason A, Thorleifsson G, Thorsteinsdottir U, Gudbjartsson DF, Gretarsdottir S, Magnusson KP, Gudmundsson G, Hicks A, Jonsson T, Grant SF, Sainz J, O'Brien SJ, Sveinbjornsdottir S, Valdimarsson EM, Matthiasson SE, Levey AI, Abramson JL, Reilly MP, Vaccarino V, Wolfe ML, Gudnason V, Quyyumi AA, Topol EJ, Rader DJ, Thorgeirsson G, Gulcher JR, Hakonarson H, Kong A, Stefansson K. A variant of the gene encoding leukotriene A4 hydrolase confers ethnicity-specific risk of myocardial infarction. Nat Genet. 2006 Jan; 38(1):68-74.
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Sabeti PC, Walsh E, Schaffner SF, Varilly P, Fry B, Hutcheson HB, Cullen M, Mikkelsen TS, Roy J, Patterson N, Cooper R, Reich D, Altshuler D, O'Brien S, Lander ES. The case for selection at CCR5-Delta32. PLoS Biol. 2005 Nov; 3(11):e378.
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Fealy S, Adler RS, Drakos MC, Kelly AM, Allen AA, Cordasco FA, Warren RF, O'Brien SJ. Patterns of vascular and anatomical response after rotator cuff repair. Am J Sports Med. 2006 Jan; 34(1):120-7.
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O'Brien SJ, Fraser CM. Genomes and evolution: the power of comparative genomics. Curr Opin Genet Dev. 2005 Dec; 15(6):569-71.
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Roca AL, O'Brien SJ. Genomic inferences from Afrotheria and the evolution of elephants. Curr Opin Genet Dev. 2005 Dec; 15(6):652-9.
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Murphy WJ, Agarwala R, Schäffer AA, Stephens R, Smith C, Crumpler NJ, David VA, O'Brien SJ. A rhesus macaque radiation hybrid map and comparative analysis with the human genome. Genomics. 2005 Oct; 86(4):383-95.
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Daar ES, Lynn HS, Donfield SM, Lail A, O'Brien SJ, Huang W, Winkler CA. Stromal cell-derived factor-1 genotype, coreceptor tropism, and HIV type 1 disease progression. J Infect Dis. 2005 Nov 1; 192(9):1597-605.
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Menotti-Raymond MA, David VA, Wachter LL, Butler JM, O'Brien SJ. An STR forensic typing system for genetic individualization of domestic cat (Felis catus) samples. J Forensic Sci. 2005 Sep; 50(5):1061-70.
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Smith MW, O'Brien SJ. Mapping by admixture linkage disequilibrium: advances, limitations and guidelines. Nat Rev Genet. 2005 Aug; 6(8):623-32.
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Murphy WJ, Larkin DM, Everts-van der Wind A, Bourque G, Tesler G, Auvil L, Beever JE, Chowdhary BP, Galibert F, Gatzke L, Hitte C, Meyers SN, Milan D, Ostrander EA, Pape G, Parker HG, Raudsepp T, Rogatcheva MB, Schook LB, Skow LC, Welge M, Womack JE, O'brien SJ, Pevzner PA, Lewin HA. Dynamics of mammalian chromosome evolution inferred from multispecies comparative maps. Science. 2005 Jul 22; 309(5734):613-7.
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Troyer JL, Pecon-Slattery J, Roelke ME, Johnson W, VandeWoude S, Vazquez-Salat N, Brown M, Frank L, Woodroffe R, Winterbach C, Winterbach H, Hemson G, Bush M, Alexander KA, Revilla E, O'Brien SJ. Seroprevalence and genomic divergence of circulating strains of feline immunodeficiency virus among Felidae and Hyaenidae species. J Virol. 2005 Jul; 79(13):8282-94.
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Thio CL, Mosbruger T, Astemborski J, Greer S, Kirk GD, O'Brien SJ, Thomas DL. Mannose binding lectin genotypes influence recovery from hepatitis B virus infection. J Virol. 2005 Jul; 79(14):9192-6.
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Verma NN, Drakos M, O'Brien SJ. Arthroscopic transfer of the long head biceps to the conjoint tendon. Arthroscopy. 2005 Jun; 21(6):764.
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Oleksyk TK, Thio CL, Truelove AL, Goedert JJ, Donfield SM, Kirk GD, Thomas DL, O'Brien SJ, Smith MW. Single nucleotide polymorphisms and haplotypes in the IL10 region associated with HCV clearance. Genes Immun. 2005 Jun; 6(4):347-57.
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Verma NN, Drakos M, O'Brien SJ. The arthroscopic active compression test. Arthroscopy. 2005 May; 21(5):634.
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Schmidt-Küntzel A, Eizirik E, O'Brien SJ, Menotti-Raymond M. Tyrosinase and tyrosinase related protein 1 alleles specify domestic cat coat color phenotypes of the albino and brown loci. J Hered. 2005 Jul-Aug; 96(4):289-301.
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Duggal P, Winkler CA, An P, Yu XF, Farzadegan H, O'Brien SJ, Beaty TH, Vlahov D. The effect of RANTES chemokine genetic variants on early HIV-1 plasma RNA among African American injection drug users. J Acquir Immune Defic Syndr. 2005 Apr 15; 38(5):584-9.
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Roca AL, Nash WG, Menninger JC, Murphy WJ, O'Brien SJ. Insertional polymorphisms of endogenous feline leukemia viruses. J Virol. 2005 Apr; 79(7):3979-86.
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De La Vega FM, Isaac H, Collins A, Scafe CR, Halldórsson BV, Su X, Lippert RA, Wang Y, Laig-Webster M, Koehler RT, Ziegle JS, Wogan LT, Stevens JF, Leinen KM, Olson SJ, Guegler KJ, You X, Xu LH, Hemken HG, Kalush F, Itakura M, Zheng Y, de Thé G, O'Brien SJ, Clark AG, Istrail S, Hunkapiller MW, Spier EG, Gilbert DA. The linkage disequilibrium maps of three human chromosomes across four populations reflect their demographic history and a common underlying recombination pattern. Genome Res. 2005 Apr; 15(4):454-62.
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Kelly AM, Drakos MC, Fealy S, Taylor SA, O'Brien SJ. Arthroscopic release of the long head of the biceps tendon: functional outcome and clinical results. Am J Sports Med. 2005 Feb; 33(2):208-13.
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Teeling EC, Springer MS, Madsen O, Bates P, O'brien SJ, Murphy WJ. A molecular phylogeny for bats illuminates biogeography and the fossil record. Science. 2005 Jan 28; 307(5709):580-4.
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He Q, Lowrie C, Shelton GD, Castellani RJ, Menotti-Raymond M, Murphy W, O'Brien SJ, Swanson WF, Fyfe JC. Inherited motor neuron disease in domestic cats: a model of spinal muscular atrophy. Pediatr Res. 2005 Mar; 57(3):324-30.
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O'Brien SJ, Johnson WE. Big cat genomics. Annu Rev Genomics Hum Genet. 2005; 6:407-29.
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O'Brien SJ. Cats. Curr Biol. 2004 Dec 14; 14(23):R988-9.
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Roca AL, Georgiadis N, O'Brien SJ. Cytonuclear genomic dissociation in African elephant species. Nat Genet. 2005 Jan; 37(1):96-100.
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Beck TW, Menninger J, Murphy WJ, Nash WG, O'brien SJ, Yuhki N. The feline major histocompatibility complex is rearranged by an inversion with a breakpoint in the distal class I region. Immunogenetics. 2005 Jan; 56(10):702-9.
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Luo SJ, Kim JH, Johnson WE, van der Walt J, Martenson J, Yuhki N, Miquelle DG, Uphyrkina O, Goodrich JM, Quigley HB, Tilson R, Brady G, Martelli P, Subramaniam V, McDougal C, Hean S, Huang SQ, Pan W, Karanth UK, Sunquist M, Smith JL, O'Brien SJ. Phylogeography and genetic ancestry of tigers (Panthera tigris). PLoS Biol. 2004 Dec; 2(12):e442.
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Murphy WJ, Pevzner PA, O'Brien SJ. Mammalian phylogenomics comes of age. Trends Genet. 2004 Dec; 20(12):631-9.
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Martin MP, Lederman MM, Hutcheson HB, Goedert JJ, Nelson GW, van Kooyk Y, Detels R, Buchbinder S, Hoots K, Vlahov D, O'Brien SJ, Carrington M. Association of DC-SIGN promoter polymorphism with increased risk for parenteral, but not mucosal, acquisition of human immunodeficiency virus type 1 infection. J Virol. 2004 Dec; 78(24):14053-6.
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Winkler CA, Hendel H, Carrington M, Smith MW, Nelson GW, O'brien SJ, Phair J, Vlahov D, Jacobson LP, Rappaport J, Vasilescu A, Bertin-Maghit S, An P, Lu W, Andrieu JM, Schächter F, Therwath A, Zagury JF. Dominant effects of CCR2-CCR5 haplotypes in HIV-1 disease progression. J Acquir Immune Defic Syndr. 2004 Dec 1; 37(4):1534-8.
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Liu C, Carrington M, Kaslow RA, Gao X, Rinaldo CR, Jacobson LP, Margolick JB, Phair J, O'Brien SJ, Detels R. Lack of associations between HLA class II alleles and resistance to HIV-1 infection among white, non-Hispanic homosexual men. J Acquir Immune Defic Syndr. 2004 Oct 1; 37(2):1313-7.
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Thio CL, Mosbruger TL, Kaslow RA, Karp CL, Strathdee SA, Vlahov D, O'Brien SJ, Astemborski J, Thomas DL. Cytotoxic T-lymphocyte antigen 4 gene and recovery from hepatitis B virus infection. J Virol. 2004 Oct; 78(20):11258-62.
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An P, Bleiber G, Duggal P, Nelson G, May M, Mangeat B, Alobwede I, Trono D, Vlahov D, Donfield S, Goedert JJ, Phair J, Buchbinder S, O'Brien SJ, Telenti A, Winkler CA. APOBEC3G genetic variants and their influence on the progression to AIDS. J Virol. 2004 Oct; 78(20):11070-6.
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Pecon-Slattery J, Pearks Wilkerson AJ, Murphy WJ, O'Brien SJ. Phylogenetic assessment of introns and SINEs within the Y chromosome using the cat family felidae as a species tree. Mol Biol Evol. 2004 Dec; 21(12):2299-309.
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Khakoo SI, Thio CL, Martin MP, Brooks CR, Gao X, Astemborski J, Cheng J, Goedert JJ, Vlahov D, Hilgartner M, Cox S, Little AM, Alexander GJ, Cramp ME, O'Brien SJ, Rosenberg WM, Thomas DL, Carrington M. HLA and NK cell inhibitory receptor genes in resolving hepatitis C virus infection. Science. 2004 Aug 6; 305(5685):872-4.
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Carson EW, Anisko EM, Restrepo C, Panariello RA, O'Brien SJ, Warren RF. Revision anterior cruciate ligament reconstruction: etiology of failures and clinical results. J Knee Surg. 2004 Jul; 17(3):127-32.
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Roca AL, Bar-Gal GK, Eizirik E, Helgen KM, Maria R, Springer MS, O'Brien SJ, Murphy WJ. Mesozoic origin for West Indian insectivores. Nature. 2004 Jun 10; 429(6992):649-51.
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Oleksyk TK, Goldfarb LG, Sivtseva T, Danilova AP, Osakovsky VL, Shrestha S, O'Brien SJ, Smith MW. Evaluating association and transmission of eight inflammatory genes with Viliuisk encephalomyelitis susceptibility. Eur J Immunogenet. 2004 Jun; 31(3):121-8.
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Karacki PS, Gao X, Thio CL, Thomas DL, Goedert JJ, Vlahov D, Kaslow RA, Strathdee S, Hilgartner MW, O'Brien SJ, Carrington M. MICA and recovery from hepatitis C virus and hepatitis B virus infections. Genes Immun. 2004 Jun; 5(4):261-6.
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Thio CL, Goedert JJ, Mosbruger T, Vlahov D, Strathdee SA, O'Brien SJ, Astemborski J, Thomas DL. An analysis of tumor necrosis factor alpha gene polymorphisms and haplotypes with natural clearance of hepatitis C virus infection. Genes Immun. 2004 Jun; 5(4):294-300.
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O'Brien SJ, Nelson GW. Human genes that limit AIDS. Nat Genet. 2004 Jun; 36(6):565-74.
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Molia S, Chomel BB, Kasten RW, Leutenegger CM, Steele BR, Marker L, Martenson JS, Keet DF, Bengis RG, Peterson RP, Munson L, O'Brien SJ. Prevalence of Bartonella infection in wild African lions (Panthera leo) and cheetahs (Acinonyx jubatus). Vet Microbiol. 2004 May 20; 100(1-2):31-41.
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Smith MW, Patterson N, Lautenberger JA, Truelove AL, McDonald GJ, Waliszewska A, Kessing BD, Malasky MJ, Scafe C, Le E, De Jager PL, Mignault AA, Yi Z, De The G, Essex M, Sankale JL, Moore JH, Poku K, Phair JP, Goedert JJ, Vlahov D, Williams SM, Tishkoff SA, Winkler CA, De La Vega FM, Woodage T, Sninsky JJ, Hafler DA, Altshuler D, Gilbert DA, O'Brien SJ, Reich D. A high-density admixture map for disease gene discovery in african americans. Am J Hum Genet. 2004 May; 74(5):1001-13.
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Patterson N, Hattangadi N, Lane B, Lohmueller KE, Hafler DA, Oksenberg JR, Hauser SL, Smith MW, O'Brien SJ, Altshuler D, Daly MJ, Reich D. Methods for high-density admixture mapping of disease genes. Am J Hum Genet. 2004 May; 74(5):979-1000.
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Roca AL, Pecon-Slattery J, O'Brien SJ. Genomically intact endogenous feline leukemia viruses of recent origin. J Virol. 2004 Apr; 78(8):4370-5.
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Troyer JL, Pecon-Slattery J, Roelke ME, Black L, Packer C, O'Brien SJ. Patterns of feline immunodeficiency virus multiple infection and genome divergence in a free-ranging population of African lions. J Virol. 2004 Apr; 78(7):3777-91.
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Pearks Wilkerson AJ, Teeling EC, Troyer JL, Bar-Gal GK, Roelke M, Marker L, Pecon-Slattery J, O'Brien SJ. Coronavirus outbreak in cheetahs: lessons for SARS. Curr Biol. 2004 Mar 23; 14(6):R227-8.
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Chomel BB, Kikuchi Y, Martenson JS, Roelke-Parker ME, Chang CC, Kasten RW, Foley JE, Laudre J, Murphy K, Swift PK, Kramer VL, O'brien SJ. Seroprevalence of Bartonella infection in American free-ranging and captive pumas (Felis concolor) and bobcats (Lynx rufus). Vet Res. 2004 Mar-Apr; 35(2):233-41.
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Kikuchi Y, Chomel BB, Kasten RW, Martenson JS, Swift PK, O'Brien SJ. Seroprevalence of Toxoplasma gondii in American free-ranging or captive pumas (Felis concolor) and bobcats (Lynx rufus). Vet Parasitol. 2004 Feb 26; 120(1-2):1-9.
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Winkler C, An P, O'Brien SJ. Patterns of ethnic diversity among the genes that influence AIDS. Hum Mol Genet. 2004 Apr 1; 13 Spec No 1:R9-19.
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Silverberg MJ, Smith MW, Chmiel JS, Detels R, Margolick JB, Rinaldo CR, O'Brien SJ, Muñoz A. Fraction of cases of acquired immunodeficiency syndrome prevented by the interactions of identified restriction gene variants. Am J Epidemiol. 2004 Feb 1; 159(3):232-41.
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Johnson WE, Godoy JA, Palomares F, Delibes M, Fernandes M, Revilla E, O'Brien SJ. Phylogenetic and phylogeographic analysis of Iberian lynx populations. J Hered. 2004 Jan-Feb; 95(1):19-28.
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Munson L, Marker L, Dubovi E, Spencer JA, Evermann JF, O'Brien SJ. Serosurvey of viral infections in free-ranging Namibian cheetahs (Acinonyx jubatus). J Wildl Dis. 2004 Jan; 40(1):23-31.
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Modi WS, Goedert JJ, Strathdee S, Buchbinder S, Detels R, Donfield S, O'Brien SJ, Winkler C. MCP-1-MCP-3-Eotaxin gene cluster influences HIV-1 transmission. AIDS. 2003 Nov 7; 17(16):2357-65.
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Breen EC, Boscardin WJ, Detels R, Jacobson LP, Smith MW, O'Brien SJ, Chmiel JS, Rinaldo CR, Lai S, Martínez-Maza O. Non-Hodgkin's B cell lymphoma in persons with acquired immunodeficiency syndrome is associated with increased serum levels of IL10, or the IL10 promoter -592 C/C genotype. Clin Immunol. 2003 Nov; 109(2):119-29.
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Faden RR, Dawson L, Bateman-House AS, Agnew DM, Bok H, Brock DW, Chakravarti A, Gao XJ, Greene M, Hansen JA, King PA, O'Brien SJ, Sachs DH, Schill KE, Siegel A, Solter D, Suter SM, Verfaillie CM, Walters LB, Gearhart JD. Public stem cell banks: considerations of justice in stem cell research and therapy. Hastings Cent Rep. 2003 Nov-Dec; 33(6):13-27.
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Murphy WJ, Bourque G, Tesler G, Pevzner P, O'Brien SJ. Reconstructing the genomic architecture of mammalian ancestors using multispecies comparative maps. Hum Genomics. 2003 Nov; 1(1):30-40.
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Dawson L, Bateman-House AS, Mueller Agnew D, Bok H, Brock DW, Chakravarti A, Greene M, King PA, O'Brien SJ, Sachs DH, Schill KE, Siegel A, Solter D, Suter SM, Verfaillie CM, Walters LB, Gearhart JD, Faden RR. Safety issues in cell-based intervention trials. Fertil Steril. 2003 Nov; 80(5):1077-85.
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Thio CL, Thomas DL, Karacki P, Gao X, Marti D, Kaslow RA, Goedert JJ, Hilgartner M, Strathdee SA, Duggal P, O'Brien SJ, Astemborski J, Carrington M. Comprehensive analysis of class I and class II HLA antigens and chronic hepatitis B virus infection. J Virol. 2003 Nov; 77(22):12083-7.
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O'Brien SJ, Murphy WJ. Genomics. A dog's breakfast? Science. 2003 Sep 26; 301(5641):1854-5.
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Zhang ZH, Shen FJ, Sun S, David VA, Zhang AJ, O'Brien SJ. [Paternity assignment of giant panda by microsatellite genotyping]. Yi Chuan. 2003 Sep; 25(5):504-10.
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Kuznetsov SB, Matveeva NM, Murphy WJ, O'Brien SJ, Serov OL. Mapping of 53 loci in American mink (Mustela vison). J Hered. 2003 Sep-Oct; 94(5):386-91.
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Teeling EC, Madsen O, Murphy WJ, Springer MS, O'Brien SJ. Nuclear gene sequences confirm an ancient link between New Zealand's short-tailed bat and South American noctilionoid bats. Mol Phylogenet Evol. 2003 Aug; 28(2):308-19.
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Uphyrkina O, O'Brien SJ. Applying molecular genetic tools to the conservation and action plan for the critically endangered Far Eastern leopard (Panthera pardus orientalis). C R Biol. 2003 Aug; 326 Suppl 1:S93-7.
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Murphy WJ, Frönicke L, O'Brien SJ, Stanyon R. The origin of human chromosome 1 and its homologs in placental mammals. Genome Res. 2003 Aug; 13(8):1880-8.
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An P, Vlahov D, Margolick JB, Phair J, O'Brien TR, Lautenberger J, O'Brien SJ, Winkler CA. A tumor necrosis factor-alpha-inducible promoter variant of interferon-gamma accelerates CD4+ T cell depletion in human immunodeficiency virus-1-infected individuals. J Infect Dis. 2003 Jul 15; 188(2):228-31.
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Moorman CT, Warren RF, Hershman EB, Crowe JF, Potter HG, Barnes R, O'Brien SJ, Guettler JH. Traumatic posterior hip subluxation in American football. J Bone Joint Surg Am. 2003 Jul; 85-A(7):1190-6.
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Tsimberidou AM, Kantarjian HM, Estey E, Cortes JE, Verstovsek S, Faderl S, Thomas DA, Garcia-Manero G, Ferrajoli A, Manning JT, Keating MJ, Albitar M, O'Brien S, Giles FJ. Outcome in patients with nonleukemic granulocytic sarcoma treated with chemotherapy with or without radiotherapy. Leukemia. 2003 Jun; 17(6):1100-3.
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Duggal P, An P, Beaty TH, Strathdee SA, Farzadegan H, Markham RB, Johnson L, O'Brien SJ, Vlahov D, Winkler CA. Genetic influence of CXCR6 chemokine receptor alleles on PCP-mediated AIDS progression among African Americans. Genes Immun. 2003 Jun; 4(4):245-50.
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Menotti-Raymond M, David V, Wachter L, Yuhki N, O'Brien SJ. Quantitative polymerase chain reaction-based assay for estimating DNA yield extracted from domestic cat specimens. Croat Med J. 2003 Jun; 44(3):327-31.
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Gillespie IA, O'Brien SJ, Adak GK, Tam CC, Frost JA, Bolton FJ, Tompkins DS. Point source outbreaks of Campylobacter jejuni infection--are they more common than we think and what might cause them? Epidemiol Infect. 2003 Jun; 130(3):367-75.
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Yuhki N, Beck T, Stephens RM, Nishigaki Y, Newmann K, O'Brien SJ. Comparative genome organization of human, murine, and feline MHC class II region. Genome Res. 2003 Jun; 13(6A):1169-79.
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Modi WS, O'Brien TR, Vlahov D, Buchbinder S, Gomperts E, Phair J, O'Brien SJ, Winkler C. Haplotype diversity in the interleukin-4 gene is not associated with HIV-1 transmission and AIDS progression. Immunogenetics. 2003 Jun; 55(3):157-64.
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Liu C, Carrington M, Kaslow RA, Gao X, Rinaldo CR, Jacobson LP, Margolick JB, Phair J, O'Brien SJ, Detels R. Association of polymorphisms in human leukocyte antigen class I and transporter associated with antigen processing genes with resistance to human immunodeficiency virus type 1 infection. J Infect Dis. 2003 May 1; 187(9):1404-10.
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Eizirik E, Yuhki N, Johnson WE, Menotti-Raymond M, Hannah SS, O'Brien SJ. Molecular genetics and evolution of melanism in the cat family. Curr Biol. 2003 Mar 4; 13(5):448-53.
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Springer MS, Murphy WJ, Eizirik E, O'Brien SJ. Placental mammal diversification and the Cretaceous-Tertiary boundary. Proc Natl Acad Sci U S A. 2003 Feb 4; 100(3):1056-61.
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Sopwith W, Ashton M, Frost JA, Tocque K, O'Brien S, Regan M, Syed Q. Enhanced surveillance of campylobacter infection in the North West of England 1997-1999. J Infect. 2003 Jan; 46(1):35-45.
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Menotti-Raymond M, David VA, Agarwala R, Schäffer AA, Stephens R, O'Brien SJ, Murphy WJ. Radiation hybrid mapping of 304 novel microsatellites in the domestic cat genome. Cytogenet Genome Res. 2003; 102(1-4):272-6.
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Menotti-Raymond M, David VA, Roelke ME, Chen ZQ, Menotti KA, Sun S, Schäffer AA, Tomlin JF, Agarwala R, O'Brien SJ, Murphy WJ. Second-generation integrated genetic linkage/radiation hybrid maps of the domestic cat (Felis catus). J Hered. 2003 Jan-Feb; 94(1):95-106.
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Beatty J, Terry A, MacDonald J, Gault E, Cevario S, O'Brien SJ, Cameron E, Neil JC. Feline immunodeficiency virus integration in B-cell lymphoma identifies a candidate tumor suppressor gene on human chromosome 15q15. Cancer Res. 2002 Dec 15; 62(24):7175-80.
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Jin X, Gao X, Ramanathan M, Deschenes GR, Nelson GW, O'Brien SJ, Goedert JJ, Ho DD, O'Brien TR, Carrington M. Human immunodeficiency virus type 1 (HIV-1)-specific CD8+-T-cell responses for groups of HIV-1-infected individuals with different HLA-B*35 genotypes. J Virol. 2002 Dec; 76(24):12603-10.
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Comstock KE, Georgiadis N, Pecon-Slattery J, Roca AL, Ostrander EA, O'Brien SJ, Wasser SK. Patterns of molecular genetic variation among African elephant populations. Mol Ecol. 2002 Dec; 11(12):2489-98.
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Palomares F, Godoy JA, Piriz A, O'Brien SJ. Faecal genetic analysis to determine the presence and distribution of elusive carnivores: design and feasibility for the Iberian lynx. Mol Ecol. 2002 Oct; 11(10):2171-82.
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Keating MJ, O'Brien S, Kontoyiannis D, Plunkett W, Koller C, Beran M, Lerner S, Kantarjian H. Results of first salvage therapy for patients refractory to a fludarabine regimen in chronic lymphocytic leukemia. Leuk Lymphoma. 2002 Sep; 43(9):1755-62.
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Kelly AM, Selby RM, Lumsden E, O'Brien SJ, Drakos MC. Arthroscopic removal of an osteoid osteoma of the shoulder. Arthroscopy. 2002 Sep; 18(7):801-6.
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Uphyrkina O, Miquelle D, Quigley H, Driscoll C, O'Brien SJ. Conservation genetics of the Far Eastern leopard (Panthera pardus orientalis). J Hered. 2002 Sep-Oct; 93(5):303-11.
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Martin MP, Gao X, Lee JH, Nelson GW, Detels R, Goedert JJ, Buchbinder S, Hoots K, Vlahov D, Trowsdale J, Wilson M, O'Brien SJ, Carrington M. Epistatic interaction between KIR3DS1 and HLA-B delays the progression to AIDS. Nat Genet. 2002 Aug; 31(4):429-34.
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An P, Nelson GW, Wang L, Donfield S, Goedert JJ, Phair J, Vlahov D, Buchbinder S, Farrar WL, Modi W, O'Brien SJ, Winkler CA. Modulating influence on HIV/AIDS by interacting RANTES gene variants. Proc Natl Acad Sci U S A. 2002 Jul 23; 99(15):10002-7.
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O'Brien SJ, Menotti-Raymond M, Murphy WJ, Yuhki N. The Feline Genome Project. Annu Rev Genet. 2002; 36:657-86.
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Faderl S, Keating MJ, Do KA, Liang SY, Kantarjian HM, O'Brien S, Garcia-Manero G, Manshouri T, Albitar M. Expression profile of 11 proteins and their prognostic significance in patients with chronic lymphocytic leukemia (CLL). Leukemia. 2002 Jun; 16(6):1045-52.
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Copeland NG, Jenkins NA, O'Brien SJ. Genomics. Mmu 16--comparative genomic highlights. Science. 2002 May 31; 296(5573):1617-8.
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Vad VB, Warren RF, Altchek DW, O'Brien SJ, Rose HA, Wickiewicz TL. Negative prognostic factors in managing massive rotator cuff tears. Clin J Sport Med. 2002 May; 12(3):151-7.
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Thio CL, Gao X, Goedert JJ, Vlahov D, Nelson KE, Hilgartner MW, O'Brien SJ, Karacki P, Astemborski J, Carrington M, Thomas DL. HLA-Cw*04 and hepatitis C virus persistence. J Virol. 2002 May; 76(10):4792-7.
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Dean M, Carrington M, O'Brien SJ. Balanced polymorphism selected by genetic versus infectious human disease. Annu Rev Genomics Hum Genet. 2002; 3:263-92.
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O'Brien SJ, Allen AA, Coleman SH, Drakos MC. The trans-rotator cuff approach to SLAP lesions: technical aspects for repair and a clinical follow-up of 31 patients at a minimum of 2 years. Arthroscopy. 2002 Apr; 18(4):372-7.
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Selby RM, O'Brien SJ, Kelly AM, Drakos M. The joint jack: report of a new technique essential for elbow arthroscopy. Arthroscopy. 2002 Apr; 18(4):440-5.
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Sheppard HW, Celum C, Michael NL, O'Brien S, Dean M, Carrington M, Dondero D, Buchbinder SP. HIV-1 infection in individuals with the CCR5-Delta32/Delta32 genotype: acquisition of syncytium-inducing virus at seroconversion. J Acquir Immune Defic Syndr. 2002 Mar 1; 29(3):307-13.
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Driscoll CA, Menotti-Raymond M, Nelson G, Goldstein D, O'Brien SJ. Genomic microsatellites as evolutionary chronometers: a test in wild cats. Genome Res. 2002 Mar; 12(3):414-23.
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Cole AC, Shay NF, O'Brien S, Beverly JL. Zinc-deficient rats are insensitive to glucoprivation caused by 2-deoxy-D-glucose. Nutr Neurosci. 2002 Feb; 5(1):59-64.
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Leite F, Sylte MJ, O'Brien S, Schultz R, Peek S, van Reeth K, Czuprynski CJ. Effect of experimental infection of cattle with bovine herpesvirus-1 (BHV-1) on the ex vivo interaction of bovine leukocytes with Mannheimia (Pasteurella) haemolytica leukotoxin. Vet Immunol Immunopathol. 2002 Jan 1; 84(1-2):97-110.
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VandeWoude S, Hageman CA, O'Brien SJ, Hoover EA. Nonpathogenic lion and puma lentiviruses impart resistance to superinfection by virulent feline immunodeficiency virus. J Acquir Immune Defic Syndr. 2002 Jan 1; 29(1):1-10.
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Anderson K, Warren RF, Altchek DW, Craig EV, O'Brien SJ. Risk factors for early failure after thermal capsulorrhaphy. Am J Sports Med. 2002 Jan-Feb; 30(1):103-7.
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Estey EH, Thall PF, Cortes JE, Giles FJ, O'Brien S, Pierce SA, Wang X, Kantarjian HM, Beran M. Comparison of idarubicin + ara-C-, fludarabine + ara-C-, and topotecan + ara-C-based regimens in treatment of newly diagnosed acute myeloid leukemia, refractory anemia with excess blasts in transformation, or refractory anemia with excess blasts. Blood. 2001 Dec 15; 98(13):3575-83.
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Murphy WJ, Eizirik E, O'Brien SJ, Madsen O, Scally M, Douady CJ, Teeling E, Ryder OA, Stanhope MJ, de Jong WW, Springer MS. Resolution of the early placental mammal radiation using Bayesian phylogenetics. Science. 2001 Dec 14; 294(5550):2348-51.
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Carrington M, O'Brien SJ. The influence of HLA genotype on AIDS. Annu Rev Med. 2003; 54:535-51.
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Murphy WJ, Page JE, Smith C, Desrosiers RC, O'Brien SJ. A radiation hybrid mapping panel for the rhesus macaque. J Hered. 2001 Nov-Dec; 92(6):516-9.
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Smith MW, Lautenberger JA, Shin HD, Chretien JP, Shrestha S, Gilbert DA, O'Brien SJ. Markers for mapping by admixture linkage disequilibrium in African American and Hispanic populations. Am J Hum Genet. 2001 Nov; 69(5):1080-94.
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Uphyrkina O, Johnson WE, Quigley H, Miquelle D, Marker L, Bush M, O'Brien SJ. Phylogenetics, genome diversity and origin of modern leopard, Panthera pardus. Mol Ecol. 2001 Nov; 10(11):2617-33.
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Carrington M, Nelson G, O'Brien SJ. Considering genetic profiles in functional studies of immune responsiveness to HIV-1. Immunol Lett. 2001 Nov 1; 79(1-2):131-40.
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O'Brien SJ, Adak GK, Gilham C. Contact with farming environment as a major risk factor for Shiga toxin (Vero cytotoxin)-producing Escherichia coli O157 infection in humans. Emerg Infect Dis. 2001 Nov-Dec; 7(6):1049-51.
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Cortes J, O'Brien S, Loscertales J, Kantarjian H, Giles F, Thomas D, Koller C, Keating M. Cyclosporin A for the treatment of cytopenia associated with chronic lymphocytic leukemia. Cancer. 2001 Oct 15; 92(8):2016-22.
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Jae-Heup K, Eizirik E, O'Brien SJ, Johnson WE. Structure and patterns of sequence variation in the mitochondrial DNA control region of the great cats. Mitochondrion. 2001 Oct; 1(3):279-92.
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Marx RG, Jones EC, Allen AA, Altchek DW, O'Brien SJ, Rodeo SA, Williams RJ, Warren RF, Wickiewicz TL. Reliability, validity, and responsiveness of four knee outcome scales for athletic patients. J Bone Joint Surg Am. 2001 Oct; 83-A(10):1459-69.
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O'Brien S, Sinclair H, Soni S, O'Dowd T, Thomas D. Trends in alcohol consumption in undergraduate third level students: 1992-1999. Ir J Med Sci. 2001 Oct-Dec; 170(4):224-7.
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O'Brien SJ, Gao X, Carrington M. HLA and AIDS: a cautionary tale. Trends Mol Med. 2001 Sep; 7(9):379-81.
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Amso NN, Watermeyer SR, Pugh N, O'Brien S, D'Angelo A. Quantification of power Doppler energy and its future potential. Fertil Steril. 2001 Sep; 76(3):583-7.
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Cole BJ, Rodeo SA, O'Brien SJ, Altchek D, Lee D, DiCarlo EF, Potter H. The anatomy and histology of the rotator interval capsule of the shoulder. Clin Orthop Relat Res. 2001 Sep; (390):129-37.
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Roca AL, Georgiadis N, Pecon-Slattery J, O'Brien SJ. Genetic evidence for two species of elephant in Africa. Science. 2001 Aug 24; 293(5534):1473-7.
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O'Brien SJ. Cell culture forensics. Proc Natl Acad Sci U S A. 2001 Jul 3; 98(14):7656-8.
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Ibrahim S, Keating M, Do KA, O'Brien S, Huh YO, Jilani I, Lerner S, Kantarjian HM, Albitar M. CD38 expression as an important prognostic factor in B-cell chronic lymphocytic leukemia. Blood. 2001 Jul 1; 98(1):181-6.
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Cortes J, Estey E, O'Brien S, Giles F, Shen Y, Koller C, Beran M, Thomas D, Keating M, Kantarjian H. High-dose liposomal daunorubicin and high-dose cytarabine combination in patients with refractory or relapsed acute myelogenous leukemia. Cancer. 2001 Jul 1; 92(1):7-14.
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O'Brien SJ, Eizirik E, Murphy WJ. Genomics. On choosing mammalian genomes for sequencing. Science. 2001 Jun 22; 292(5525):2264-6.
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Murphy WJ, Stanyon R, O'Brien SJ. Evolution of mammalian genome organization inferred from comparative gene mapping. Genome Biol. 2001; 2(6):REVIEWS0005.
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Culver M, Menotti-Raymond MA, O'Brien SJ. Patterns of size homoplasy at 10 microsatellite loci in pumas (Puma concolor). Mol Biol Evol. 2001 Jun; 18(6):1151-6.
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Ravandi F, Kantarjian HM, Talpaz M, O'Brien S, Faderl S, Giles FJ, Thomas D, Cortes J, Andreeff M, Estrov Z, Rios MB, Albitar M. Expression of apoptosis proteins in chronic myelogenous leukemia: associations and significance. Cancer. 2001 Jun 1; 91(11):1964-72.
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Sun S, Murphy WJ, Menotti-Raymond M, O'Brien SJ. Integration of the feline radiation hybrid and linkage maps. Mamm Genome. 2001 Jun; 12(6):436-41.
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Gao X, Nelson GW, Karacki P, Martin MP, Phair J, Kaslow R, Goedert JJ, Buchbinder S, Hoots K, Vlahov D, O'Brien SJ, Carrington M. Effect of a single amino acid change in MHC class I molecules on the rate of progression to AIDS. N Engl J Med. 2001 May 31; 344(22):1668-75.
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Thio CL, Thomas DL, Goedert JJ, Vlahov D, Nelson KE, Hilgartner MW, O'Brien SJ, Karacki P, Marti D, Astemborski J, Carrington M. Racial differences in HLA class II associations with hepatitis C virus outcomes. J Infect Dis. 2001 Jul 1; 184(1):16-21.
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Di Raimondo F, Giustolisi R, Lerner S, Cacciola E, O'Brien S, Kantarjian H, Keating MJ. Retrospective study of the prognostic role of serum thymidine kinase level in CLL patients with active disease treated with fludarabine. Ann Oncol. 2001 May; 12(5):621-5.
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Hendel H, Winkler C, An P, Roemer-Binns E, Nelson G, Haumont P, O'Brien S, Khalilli K, Zagury D, Rappaport J, Zagury JF. Validation of genetic case-control studies in AIDS and application to the CX3CR1 polymorphism. J Acquir Immune Defic Syndr. 2001 Apr 15; 26(5):507-11.
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Gandhi V, Plunkett W, Weller S, Du M, Ayres M, Rodriguez CO, Ramakrishna P, Rosner GL, Hodge JP, O'Brien S, Keating MJ. Evaluation of the combination of nelarabine and fludarabine in leukemias: clinical response, pharmacokinetics, and pharmacodynamics in leukemia cells. J Clin Oncol. 2001 Apr 15; 19(8):2142-52.
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Yamashita TE, Phair JP, Muñoz A, Margolick JB, Detels R, O'Brien SJ, Mellors JW, Wolinsky SM, Jacobson LP. Immunologic and virologic response to highly active antiretroviral therapy in the Multicenter AIDS Cohort Study. AIDS. 2001 Apr 13; 15(6):735-46.
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Ferrajoli A, Manshouri T, Estrov Z, Keating MJ, O'Brien S, Lerner S, Beran M, Kantarjian HM, Freireich EJ, Albitar M. High levels of vascular endothelial growth factor receptor-2 correlate with shortened survival in chronic lymphocytic leukemia. Clin Cancer Res. 2001 Apr; 7(4):795-9.
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Parker JS, Murphy WJ, Wang D, O'Brien SJ, Parrish CR. Canine and feline parvoviruses can use human or feline transferrin receptors to bind, enter, and infect cells. J Virol. 2001 Apr; 75(8):3896-902.
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Philipp BL, Merewood A, O'Brien S. Physicians and breastfeeding promotion in the United States: a call for action. Pediatrics. 2001 Mar; 107(3):584-7.
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Eizirik E, Murphy WJ, O'Brien SJ. Molecular dating and biogeography of the early placental mammal radiation. J Hered. 2001 Mar-Apr; 92(2):212-9.
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Murphy WJ, Eizirik E, Johnson WE, Zhang YP, Ryder OA, O'Brien SJ. Molecular phylogenetics and the origins of placental mammals. Nature. 2001 Feb 1; 409(6820):614-8.
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Beck TW, Menninger J, Voigt G, Newmann K, Nishigaki Y, Nash WG, Stephens RM, Wang Y, de Jong PJ, O'Brien SJ, Yuhki N. Comparative feline genomics: a BAC/PAC contig map of the major histocompatibility complex class II region. Genomics. 2001 Feb 1; 71(3):282-95.
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Daar ES, Lynn H, Donfield S, Gomperts E, O'Brien SJ, Hilgartner MW, Hoots WK, Chernoff D, Arkin S, Wong WY, Winkler CA. Hepatitis C virus load is associated with human immunodeficiency virus type 1 disease progression in hemophiliacs. J Infect Dis. 2001 Feb 15; 183(4):589-95.
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Eizirik E, Kim JH, Menotti-Raymond M, Crawshaw PG, O'Brien SJ, Johnson WE. Phylogeography, population history and conservation genetics of jaguars (Panthera onca, Mammalia, Felidae). Mol Ecol. 2001 Jan; 10(1):65-79.
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Nash WG, Menninger JC, Wienberg J, Padilla-Nash HM, O'Brien SJ. The pattern of phylogenomic evolution of the Canidae. Cytogenet Cell Genet. 2001; 95(3-4):210-24.
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Williams RJ, Marx RG, Barnes R, O'Brien SJ, Warren RF. Fractures about the orbit in professional American football players. Am J Sports Med. 2001 Jan-Feb; 29(1):55-7.
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Shin HD, Winkler C, Stephens JC, Bream J, Young H, Goedert JJ, O'Brien TR, Vlahov D, Buchbinder S, Giorgi J, Rinaldo C, Donfield S, Willoughby A, O'Brien SJ, Smith MW. Genetic restriction of HIV-1 pathogenesis to AIDS by promoter alleles of IL10. Proc Natl Acad Sci U S A. 2000 Dec 19; 97(26):14467-72.
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An P, Luo H, Lu T, O'Brien SJ, Winkler C. Genetic heterogeneity and molecular epidemiology of GB virus C/hepatitis G virus in China. J Hum Virol. 2000 Nov-Dec; 3(6):299-305.
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Carr V, Halpin S, Lau N, O'Brien S, Beckmann J, Lewin T. A risk factor screening and assessment protocol for schizophrenia and related psychosis. Aust N Z J Psychiatry. 2000 Nov; 34 Suppl:S170-80.
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Sarno RJ, David VA, Franklin WL, O'Brien SJ, Johnson WE. Development of microsatellite markers in the guanaco, Lama guanicoe: utility for South American camelids. Mol Ecol. 2000 Nov; 9(11):1922-4.
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O'Brien SJ, Moore JP. The effect of genetic variation in chemokines and their receptors on HIV transmission and progression to AIDS. Immunol Rev. 2000 Oct; 177:99-111.
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An P, Martin MP, Nelson GW, Carrington M, Smith MW, Gong K, Vlahov D, O'Brien SJ, Winkler CA. Influence of CCR5 promoter haplotypes on AIDS progression in African-Americans. AIDS. 2000 Sep 29; 14(14):2117-22.
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Aguayo A, Kantarjian H, Manshouri T, Gidel C, Estey E, Thomas D, Koller C, Estrov Z, O'Brien S, Keating M, Freireich E, Albitar M. Angiogenesis in acute and chronic leukemias and myelodysplastic syndromes. Blood. 2000 Sep 15; 96(6):2240-5.
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Aguayo A, O'Brien S, Keating M, Manshouri T, Gidel C, Barlogie B, Beran M, Koller C, Kantarjian H, Albitar M. Clinical relevance of intracellular vascular endothelial growth factor levels in B-cell chronic lymphocytic leukemia. Blood. 2000 Jul 15; 96(2):768-70.
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Pecon Slattery J, Sanner-Wachter L, O'Brien SJ. Novel gene conversion between X-Y homologues located in the nonrecombining region of the Y chromosome in Felidae (Mammalia). Proc Natl Acad Sci U S A. 2000 May 9; 97(10):5307-12.
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Murphy WJ, Sun S, Chen Z, Yuhki N, Hirschmann D, Menotti-Raymond M, O'Brien SJ. A radiation hybrid map of the cat genome: implications for comparative mapping. Genome Res. 2000 May; 10(5):691-702.
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Fealy S, Rodeo SA, Dicarlo EF, O'Brien SJ. The developmental anatomy of the neonatal glenohumeral joint. J Shoulder Elbow Surg. 2000 May-Jun; 9(3):217-22.
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Slattery JP, Murphy WJ, O'Brien SJ. Patterns of diversity among SINE elements isolated from three Y-chromosome genes in carnivores. Mol Biol Evol. 2000 May; 17(5):825-9.
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Alexander L, Weiskopf E, Greenough TC, Gaddis NC, Auerbach MR, Malim MH, O'Brien SJ, Walker BD, Sullivan JL, Desrosiers RC. Unusual polymorphisms in human immunodeficiency virus type 1 associated with nonprogressive infection. J Virol. 2000 May; 74(9):4361-76.
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Culver M, Johnson WE, Pecon-Slattery J, O'Brien SJ. Genomic ancestry of the American puma (Puma concolor). J Hered. 2000 May-Jun; 91(3):186-97.
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Lautenberger JA, Stephens JC, O'Brien SJ, Smith MW. Significant admixture linkage disequilibrium across 30 cM around the FY locus in African Americans. Am J Hum Genet. 2000 Mar; 66(3):969-78.
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Haidar MA, Kantarjian H, Manshouri T, Chang CY, O'Brien S, Freireich E, Keating M, Albitar M. ATM gene deletion in patients with adult acute lymphoblastic leukemia. Cancer. 2000 Mar 1; 88(5):1057-62.
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Kantarjian HM, O'Brien S, Smith TL, Cortes J, Giles FJ, Beran M, Pierce S, Huh Y, Andreeff M, Koller C, Ha CS, Keating MJ, Murphy S, Freireich EJ. Results of treatment with hyper-CVAD, a dose-intensive regimen, in adult acute lymphocytic leukemia. J Clin Oncol. 2000 Feb; 18(3):547-61.
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O'Brien SJ, Nelson GW, Winkler CA, Smith MW. Polygenic and multifactorial disease gene association in man: Lessons from AIDS. Annu Rev Genet. 2000; 34:563-591.
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Kenter K, Behr CT, Warren RF, O'Brien SJ, Barnes R. Acute elbow injuries in the National Football League. J Shoulder Elbow Surg. 2000 Jan-Feb; 9(1):1-5.
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Murphy WJ, Sun S, Chen ZQ, Pecon-Slattery J, O'Brien SJ. Extensive conservation of sex chromosome organization between cat and human revealed by parallel radiation hybrid mapping. Genome Res. 1999 Dec; 9(12):1223-30.
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Caetano AR, Shiue YL, Lyons LA, O'Brien SJ, Laughlin TF, Bowling AT, Murray JD. A comparative gene map of the horse (Equus caballus). Genome Res. 1999 Dec; 9(12):1239-49.
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Greenough TC, Brettler DB, Kirchhoff F, Alexander L, Desrosiers RC, O'Brien SJ, Somasundaran M, Luzuriaga K, Sullivan JL. Long-term nonprogressive infection with human immunodeficiency virus type 1 in a hemophilia cohort. J Infect Dis. 1999 Dec; 180(6):1790-802.
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Johnson WE, Slattery JP, Eizirik E, Kim JH, Raymond MM, Bonacic C, Cambre R, Crawshaw P, Nunes A, Seuánez HN, Moreira MA, Seymour KL, Simon F, Swanson W, O'Brien SJ. Disparate phylogeographic patterns of molecular genetic variation in four closely related South American small cat species. Mol Ecol. 1999 Dec; 8(12 Suppl 1):S79-94.
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O'Brien SJ, Stanyon R. Phylogenomics. Ancestral primate viewed. Nature. 1999 Nov 25; 402(6760):365-6.
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Caetano AR, Lyons LA, Laughlin TF, O'Brien SJ, Murray JD, Bowling AT. Equine synteny mapping of comparative anchor tagged sequences (CATS) from human Chromosome 5. Mamm Genome. 1999 Nov; 10(11):1082-4.
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McKenzie LM, Pecon-Slattery J, Carrington M, O'Brien SJ. Taxonomic hierarchy of HLA class I allele sequences. Genes Immun. 1999 Nov; 1(2):120-9.
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O'Brien SJ, Menotti-Raymond M, Murphy WJ, Nash WG, Wienberg J, Stanyon R, Copeland NG, Jenkins NA, Womack JE, Marshall Graves JA. The promise of comparative genomics in mammals. Science. 1999 Oct 15; 286(5439):458-62, 479-81.
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O'Brien SJ, Eisenberg JF, Miyamoto M, Hedges SB, Kumar S, Wilson DE, Menotti-Raymond M, Murphy WJ, Nash WG, Lyons LA, Menninger JC, Stanyon R, Wienberg J, Copeland NG, Jenkins NA, Gellin J, Yerle M, Andersson L, Womack J, Broad T, Postlethwait J, Serov O, Bailey E, James MR, Marshall Graves JA, et al. Genome maps 10. Comparative genomics. Mammalian radiations. Wall chart. Science. 1999 Oct 15; 286(5439):463-78.
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Su B, Jin L, Hu F, Xiao J, Luo J, Lu D, Zhang W, Chu J, Du R, Geng Z, Qiu X, Xue J, Tan J, O'Brien SJ, Chakraborty R. Distribution of two HIV-1-resistant polymorphisms (SDF1-3'A and CCR2-64I) in East Asian and world populations and its implication in AIDS epidemiology. Am J Hum Genet. 1999 Oct; 65(4):1047-53.
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Waits LP, Sullivan J, O'Brien SJ, Ward RH. Rapid radiation events in the family Ursidae indicated by likelihood phylogenetic estimation from multiple fragments of mtDNA. Mol Phylogenet Evol. 1999 Oct; 13(1):82-92.
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Nguyêñ GT, Carrington M, Beeler JA, Dean M, Aledort LM, Blatt PM, Cohen AR, DiMichele D, Eyster ME, Kessler CM, Konkle B, Leissinger C, Luban N, O'Brien SJ, Goedert JJ, O'Brien TR. Phenotypic expressions of CCR5-delta32/delta32 homozygosity. J Acquir Immune Defic Syndr. 1999 Sep 1; 22(1):75-82.
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Beran M, Estey E, O'Brien S, Cortes J, Koller CA, Giles FJ, Kornblau S, Andreeff M, Vey N, Pierce SR, Hayes K, Wong GC, Keating M, Kantarjian H. Topotecan and cytarabine is an active combination regimen in myelodysplastic syndromes and chronic myelomonocytic leukemia. J Clin Oncol. 1999 Sep; 17(9):2819-30.
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Huttley GA, Smith MW, Carrington M, O'Brien SJ. A scan for linkage disequilibrium across the human genome. Genetics. 1999 Aug; 152(4):1711-22.
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Dean M, Jacobson LP, McFarlane G, Margolick JB, Jenkins FJ, Howard OM, Dong HF, Goedert JJ, Buchbinder S, Gomperts E, Vlahov D, Oppenheim JJ, O'Brien SJ, Carrington M. Reduced risk of AIDS lymphoma in individuals heterozygous for the CCR5-delta32 mutation. Cancer Res. 1999 Aug 1; 59(15):3561-4.
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Daar ES, Lynn H, Donfield S, Gomperts E, Hilgartner MW, Hoots K, Chernoff D, Winkler C, O'Brien SJ. Effects of plasma HIV RNA, CD4+ T lymphocytes, and the chemokine receptors CCR5 and CCR2b on HIV disease progression in hemophiliacs. Hemophilia Growth and Development Study. J Acquir Immune Defic Syndr. 1999 Aug 1; 21(4):317-25.
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Chen ZQ, Lautenberger JA, Lyons LA, McKenzie L, O'Brien SJ. A human genome map of comparative anchor tagged sequences. J Hered. 1999 Jul-Aug; 90(4):477-84.
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Wall MS, Deng XH, Torzilli PA, Doty SB, O'Brien SJ, Warren RF. Thermal modification of collagen. J Shoulder Elbow Surg. 1999 Jul-Aug; 8(4):339-44.
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Dabaja BS, Faderl S, Thomas D, Cortes J, O'Brien S, Nasr F, Pierce S, Hayes K, Glassman A, Keating M, Kantarjian HM. Deletions and losses in chromosomes 5 or 7 in adult acute lymphocytic leukemia: incidence, associations and implications. Leukemia. 1999 Jun; 13(6):869-72.
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Hendel H, Caillat-Zucman S, Lebuanec H, Carrington M, O'Brien S, Andrieu JM, Schächter F, Zagury D, Rappaport J, Winkler C, Nelson GW, Zagury JF. New class I and II HLA alleles strongly associated with opposite patterns of progression to AIDS. J Immunol. 1999 Jun 1; 162(11):6942-6.
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Neal KR, Nguyen-Van-Tam J, Monk P, O'Brien SJ, Stuart J, Ramsay M. Invasive meningococcal disease among university undergraduates: association with universities providing relatively large amounts of catered hall accommodation. Epidemiol Infect. 1999 Jun; 122(3):351-7.
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Bryan BM, Lutz GE, O'Brien SJ. Sural nerve entrapment after injury to the gastrocnemius: a case report. Arch Phys Med Rehabil. 1999 May; 80(5):604-6.
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Hoelzel AR, Stephens JC, O'Brien SJ. Molecular genetic diversity and evolution at the MHC DQB locus in four species of pinnipeds. Mol Biol Evol. 1999 May; 16(5):611-8.
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Bream JH, Young HA, Rice N, Martin MP, Smith MW, Carrington M, O'Brien SJ. CCR5 promoter alleles and specific DNA binding factors. Science. 1999 Apr 9; 284(5412):223.
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Murphy WJ, Menotti-Raymond M, Lyons LA, Thompson MA, O'Brien SJ. Development of a feline whole genome radiation hybrid panel and comparative mapping of human chromosome 12 and 22 loci. Genomics. 1999 Apr 1; 57(1):1-8.
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Thio CL, Carrington M, Marti D, O'Brien SJ, Vlahov D, Nelson KE, Astemborski J, Thomas DL. Class II HLA alleles and hepatitis B virus persistence in African Americans. J Infect Dis. 1999 Apr; 179(4):1004-6.
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Menotti-Raymond M, David VA, Lyons LA, Schäffer AA, Tomlin JF, Hutton MK, O'Brien SJ. A genetic linkage map of microsatellites in the domestic cat (Felis catus). Genomics. 1999 Apr 1; 57(1):9-23.
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Issa JP, Kantarjian H, Mohan A, O'Brien S, Cortes J, Pierce S, Talpaz M. Methylation of the ABL1 promoter in chronic myelogenous leukemia: lack of prognostic significance. Blood. 1999 Mar 15; 93(6):2075-80.
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Carrington M, Nelson GW, Martin MP, Kissner T, Vlahov D, Goedert JJ, Kaslow R, Buchbinder S, Hoots K, O'Brien SJ. HLA and HIV-1: heterozygote advantage and B*35-Cw*04 disadvantage. Science. 1999 Mar 12; 283(5408):1748-52.
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O'Brien SJ, Yuhki N. Comparative genome organization of the major histocompatibility complex: lessons from the Felidae. Immunol Rev. 1999 Feb; 167:133-44.
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Carrington M, Dean M, Martin MP, O'Brien SJ. Genetics of HIV-1 infection: chemokine receptor CCR5 polymorphism and its consequences. Hum Mol Genet. 1999; 8(10):1939-45.
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Lyons LA, Kehler JS, O'Brien SJ. Development of comparative anchor tagged sequences (CATS) for canine genome mapping. J Hered. 1999 Jan-Feb; 90(1):15-26.
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Martin MP, Dean M, Smith MW, Winkler C, Gerrard B, Michael NL, Lee B, Doms RW, Margolick J, Buchbinder S, Goedert JJ, O'Brien TR, Hilgartner MW, Vlahov D, O'Brien SJ, Carrington M. Genetic acceleration of AIDS progression by a promoter variant of CCR5. Science. 1998 Dec 4; 282(5395):1907-11.
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Martin MP, Carrington M, Dean M, O'Brien SJ, Sheppard HW, Wegner SA, Michael NL. CXCR4 polymorphisms and HIV-1 pathogenesis. J Acquir Immune Defic Syndr Hum Retrovirol. 1998 Dec 1; 19(4):430.
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Hendel H, Hénon N, Lebuanec H, Lachgar A, Poncelet H, Caillat-Zucman S, Winkler CA, Smith MW, Kenefic L, O'Brien S, Lu W, Andrieu JM, Zagury D, Schächter F, Rappaport J, Zagury JF. Distinctive effects of CCR5, CCR2, and SDF1 genetic polymorphisms in AIDS progression. J Acquir Immune Defic Syndr Hum Retrovirol. 1998 Dec 1; 19(4):381-6.
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Carpenter MA, Brown EW, MacDonald DW, O'brien SJ. Phylogeographic patterns of feline immunodeficiency virus genetic diversity in the domestic cat. Virology. 1998 Nov 25; 251(2):234-43.
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Saah AJ, Hoover DR, Weng S, Carrington M, Mellors J, Rinaldo CR, Mann D, Apple R, Phair JP, Detels R, O'Brien S, Enger C, Johnson P, Kaslow RA. Association of HLA profiles with early plasma viral load, CD4+ cell count and rate of progression to AIDS following acute HIV-1 infection. Multicenter AIDS Cohort Study. AIDS. 1998 Nov 12; 12(16):2107-13.
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Eizirik E, Bonatto SL, Johnson WE, Crawshaw PG, Vié JC, Brousset DM, O'Brien SJ, Salzano FM. Phylogeographic patterns and evolution of the mitochondrial DNA control region in two neotropical cats (Mammalia, felidae). J Mol Evol. 1998 Nov; 47(5):613-24.
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MacGillivray JD, Fealy S, Potter HG, O'Brien SJ. Multiplanar analysis of acromion morphology. Am J Sports Med. 1998 Nov-Dec; 26(6):836-40.
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Carpenter MA, Appel MJ, Roelke-Parker ME, Munson L, Hofer H, East M, O'Brien SJ. Genetic characterization of canine distemper virus in Serengeti carnivores. Vet Immunol Immunopathol. 1998 Oct 23; 65(2-4):259-66.
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Lee B, Doranz BJ, Rana S, Yi Y, Mellado M, Frade JM, Martinez-A C, O'Brien SJ, Dean M, Collman RG, Doms RW. Influence of the CCR2-V64I polymorphism on human immunodeficiency virus type 1 coreceptor activity and on chemokine receptor function of CCR2b, CCR3, CCR5, and CXCR4. J Virol. 1998 Sep; 72(9):7450-8.
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O'Brien SJ, Pagnani MJ, Fealy S, McGlynn SR, Wilson JB. The active compression test: a new and effective test for diagnosing labral tears and acromioclavicular joint abnormality. Am J Sports Med. 1998 Sep-Oct; 26(5):610-3.
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Keating MJ, O'Brien S, Lerner S, Koller C, Beran M, Robertson LE, Freireich EJ, Estey E, Kantarjian H. Long-term follow-up of patients with chronic lymphocytic leukemia (CLL) receiving fludarabine regimens as initial therapy. Blood. 1998 Aug 15; 92(4):1165-71.
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Lachs MS, Williams CS, O'Brien S, Pillemer KA, Charlson ME. The mortality of elder mistreatment. JAMA. 1998 Aug 5; 280(5):428-32.
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O'Brien SJ. AIDS: a role for host genes. Hosp Pract (Minneap). 1998 Jul 15; 33(7):53-6, 59-60, 66-7 passim.
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Michael NL, Nelson JA, KewalRamani VN, Chang G, O'Brien SJ, Mascola JR, Volsky B, Louder M, White GC, Littman DR, Swanstrom R, O'Brien TR. Exclusive and persistent use of the entry coreceptor CXCR4 by human immunodeficiency virus type 1 from a subject homozygous for CCR5 delta32. J Virol. 1998 Jul; 72(7):6040-7.
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Cortes J, Kantarjian H, O'Brien S, Kurzrock R, Keating M, Talpaz M. GM-CSF can improve the cytogenetic response obtained with interferon-alpha therapy in patients with chronic myelogenous leukemia. Leukemia. 1998 Jun; 12(6):860-4.
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Stephens JC, Reich DE, Goldstein DB, Shin HD, Smith MW, Carrington M, Winkler C, Huttley GA, Allikmets R, Schriml L, Gerrard B, Malasky M, Ramos MD, Morlot S, Tzetis M, Oddoux C, di Giovine FS, Nasioulas G, Chandler D, Aseev M, Hanson M, Kalaydjieva L, Glavac D, Gasparini P, Kanavakis E, Claustres M, Kambouris M, Ostrer H, Duff G, Baranov V, Sibul H, Metspalu A, Goldman D, Martin N, Duffy D, Schmidtke J, Estivill X, O'Brien SJ, Dean M. Dating the origin of the CCR5-Delta32 AIDS-resistance allele by the coalescence of haplotypes. Am J Hum Genet. 1998 Jun; 62(6):1507-15.
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Anzala AO, Ball TB, Rostron T, O'Brien SJ, Plummer FA, Rowland-Jones SL. CCR2-64I allele and genotype association with delayed AIDS progression in African women. University of Nairobi Collaboration for HIV Research. Lancet. 1998 May 30; 351(9116):1632-3.
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Johnson WE, Culver M, Iriarte JA, Eizirik E, Seymour KL, O'Brien SJ. Tracking the evolution of the elusive Andean mountain cat (Oreailurus jacobita) from mitochondrial DNA. J Hered. 1998 May-Jun; 89(3):227-32.
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Zagury D, Lachgar A, Chams V, Fall LS, Bernard J, Zagury JF, Bizzini B, Gringeri A, Santagostino E, Rappaport J, Feldman M, O'Brien SJ, Burny A, Gallo RC. C-C chemokines, pivotal in protection against HIV type 1 infection. Proc Natl Acad Sci U S A. 1998 Mar 31; 95(7):3857-61.
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O'Brien TR, Padian NS, Hodge T, Goedert JJ, O'Brien SJ, Carrington M. CCR-5 genotype and sexual transmission of HIV-1. AIDS. 1998 Mar 5; 12(4):444-5.
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Pecon Slattery J, O'Brien SJ. Patterns of Y and X chromosome DNA sequence divergence during the Felidae radiation. Genetics. 1998 Mar; 148(3):1245-55.
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Simonian PT, Wickiewicz TL, O'Brien SJ, Dines JS, Schatz JA, Warren RF. Pretibial cyst formation after anterior cruciate ligament surgery with soft tissue autografts. Arthroscopy. 1998 Mar; 14(2):215-20.
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Winkler C, Modi W, Smith MW, Nelson GW, Wu X, Carrington M, Dean M, Honjo T, Tashiro K, Yabe D, Buchbinder S, Vittinghoff E, Goedert JJ, O'Brien TR, Jacobson LP, Detels R, Donfield S, Willoughby A, Gomperts E, Vlahov D, Phair J, O'Brien SJ. Genetic restriction of AIDS pathogenesis by an SDF-1 chemokine gene variant. ALIVE Study, Hemophilia Growth and Development Study (HGDS), Multicenter AIDS Cohort Study (MACS), Multicenter Hemophilia Cohort Study (MHCS), San Francisco City Cohort (SFCC) Science. 1998 Jan 16; 279(5349):389-93.
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Cho K, Youn HY, Okuda M, Satoh H, Cevario S, O'Brien SJ, Watari T, Tsujimoto H, Hasegawa A. Cloning and mapping of cat (Felis catus) immunoglobulin and T-cell receptor genes. Immunogenetics. 1998; 47(3):226-33.
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Nash WG, Wienberg J, Ferguson-Smith MA, Menninger JC, O'Brien SJ. Comparative genomics: tracking chromosome evolution in the family ursidae using reciprocal chromosome painting. Cytogenet Cell Genet. 1998; 83(3-4):182-92.
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Simonian PT, Fealy S, Hidaka C, O'Brien SJ, Warren RF. Anterior cruciate ligament injury and patella dislocation: a report of nine cases. Arthroscopy. 1998 Jan-Feb; 14(1):80-4.
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Patel DV, Breazeale NM, Behr CT, Warren RF, Wickiewicz TL, O'Brien SJ. Osteonecrosis of the knee: current clinical concepts. Knee Surg Sports Traumatol Arthrosc. 1998; 6(1):2-11.
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Carrington M, Kissner T, Gerrard B, Ivanov S, O'Brien SJ, Dean M. Novel alleles of the chemokine-receptor gene CCR5. Am J Hum Genet. 1997 Dec; 61(6):1261-7.
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Koller CA, Kantarjian HM, Thomas D, O'Brien S, Rios MB, Kornblau S, Murphy S, Keating M. The hyper-CVAD regimen improves outcome in relapsed acute lymphoblastic leukemia. Leukemia. 1997 Dec; 11(12):2039-44.
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Menotti-Raymond M, David VA, Stephens JC, Lyons LA, O'Brien SJ. Genetic individualization of domestic cats using feline STR loci for forensic applications. J Forensic Sci. 1997 Nov; 42(6):1039-51.
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Smith MW, Carrington M, Winkler C, Lomb D, Dean M, Huttley G, O'Brien SJ. CCR2 chemokine receptor and AIDS progression. Nat Med. 1997 Oct; 3(10):1052-3.
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O'Brien SJ, Wienberg J, Lyons LA. Comparative genomics: lessons from cats. Trends Genet. 1997 Oct; 13(10):393-9.
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An P, Wei L, Wu X, Yuhki N, O'Brien SJ, Winkler C. Evolutionary analysis of the 5'-terminal region of hepatitis G virus isolated from different regions in China. J Gen Virol. 1997 Oct; 78 ( Pt 10):2477-82.
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Okuda M, Minehata K, Setoguchi A, Cho KW, Nakamura N, Nishigaki K, Watari T, Cevario S, O'Brien SJ, Tsujimoto H, Hasegawa A. Cloning and chromosome mapping of the feline genes p21WAF1 and p27Kip1. Gene. 1997 Oct 1; 198(1-2):141-7.
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Smith MW, Dean M, Carrington M, Huttley GA, O'Brien SJ. CCR5-delta 32 gene deletion in HIV-1 infected patients. Lancet. 1997 Sep 6; 350(9079):741; author reply 742.
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O'Brien SJ, Cevario SJ, Martenson JS, Thompson MA, Nash WG, Chang E, Graves JA, Spencer JA, Cho KW, Tsujimoto H, Lyons LA. Comparative gene mapping in the domestic cat (Felis catus). J Hered. 1997 Sep-Oct; 88(5):408-14.
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O'Brien SJ, Dean M. In search of AIDS-resistance genes. Sci Am. 1997 Sep; 277(3):44-51.
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Smith MW, Dean M, Carrington M, Winkler C, Huttley GA, Lomb DA, Goedert JJ, O'Brien TR, Jacobson LP, Kaslow R, Buchbinder S, Vittinghoff E, Vlahov D, Hoots K, Hilgartner MW, O'Brien SJ. Contrasting genetic influence of CCR2 and CCR5 variants on HIV-1 infection and disease progression. Hemophilia Growth and Development Study (HGDS), Multicenter AIDS Cohort Study (MACS), Multicenter Hemophilia Cohort Study (MHCS), San Francisco City Cohort (SFCC), ALIVE Study. Science. 1997 Aug 15; 277(5328):959-65.
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Martin SD, Warren RF, Martin TL, Kennedy K, O'Brien SJ, Wickiewicz TL. Suprascapular neuropathy. Results of non-operative treatment. J Bone Joint Surg Am. 1997 Aug; 79(8):1159-65.
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Callaway GH, Field LD, Deng XH, Torzilli PA, O'Brien SJ, Altchek DW, Warren RF. Biomechanical evaluation of the medial collateral ligament of the elbow. J Bone Joint Surg Am. 1997 Aug; 79(8):1223-31.
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O'Brien SJ, Gonzalez DM, Wright JM, Fealy S. The adduction distraction maneuver. Arthroscopy. 1997 Aug; 13(4):530-2.
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VandeWoude S, O'Brien SJ, Langelier K, Hardy WD, Slattery JP, Zuckerman EE, Hoover EA. Growth of lion and puma lentiviruses in domestic cat cells and comparisons with FIV. Virology. 1997 Jun 23; 233(1):185-92.
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Giralt S, Estey E, Albitar M, van Besien K, Rondón G, Anderlini P, O'Brien S, Khouri I, Gajewski J, Mehra R, Claxton D, Andersson B, Beran M, Przepiorka D, Koller C, Kornblau S, Kørbling M, Keating M, Kantarjian H, Champlin R. Engraftment of allogeneic hematopoietic progenitor cells with purine analog-containing chemotherapy: harnessing graft-versus-leukemia without myeloablative therapy. Blood. 1997 Jun 15; 89(12):4531-6.
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Giri A, Slattery JP, Heneine W, Gessain A, Rivadeneira E, Desrosiers RC, Rosen L, Anthony R, Pamungkas J, Iskandriati D, Richards AL, Herve V, McClure H, O'Brien SJ, Franchini G. The tax gene sequences form two divergent monophyletic lineages corresponding to types I and II of simian and human T-cell leukemia/lymphotropic viruses. Virology. 1997 Apr 28; 231(1):96-104.
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Menotti-Raymond MA, David VA, O'Brien SJ. Pet cat hair implicates murder suspect. Nature. 1997 Apr 24; 386(6627):774.
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VandeWoude S, O'Brien SJ, Hoover EA. Infectivity of lion and puma lentiviruses for domestic cats. J Gen Virol. 1997 Apr; 78 ( Pt 4):795-800.
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Yuhki N, O'Brien SJ. Nature and origin of polymorphism in feline MHC class II DRA and DRB genes. J Immunol. 1997 Mar 15; 158(6):2822-33.
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Williams RJ, Laurencin CT, Warren RF, Speciale AC, Brause BD, O'Brien S. Septic arthritis after arthroscopic anterior cruciate ligament reconstruction. Diagnosis and management. Am J Sports Med. 1997 Mar-Apr; 25(2):261-7.
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Lopez JV, Culver M, Stephens JC, Johnson WE, O'Brien SJ. Rates of nuclear and cytoplasmic mitochondrial DNA sequence divergence in mammals. Mol Biol Evol. 1997 Mar; 14(3):277-86.
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Taylor AC, Graves JM, Murray ND, O'Brien SJ, Yuhki N, Sherwin B. Conservation genetics of the koala (Phascolarctos cinereus): low mitochondrial DNA variation amongst southern Australian populations. Genet Res. 1997 Feb; 69(1):25-33.
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Gusmer PB, Potter HG, Donovan WD, O'Brien SJ. MR imaging of the shoulder after rotator cuff repair. AJR Am J Roentgenol. 1997 Feb; 168(2):559-63.
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Wienberg J, Stanyon R, Nash WG, O'Brien PC, Yang F, O'Brien SJ, Ferguson-Smith MA. Conservation of human vs. feline genome organization revealed by reciprocal chromosome painting. Cytogenet Cell Genet. 1997; 77(3-4):211-7.
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Lyons LA, Laughlin TF, Copeland NG, Jenkins NA, Womack JE, O'Brien SJ. Comparative anchor tagged sequences (CATS) for integrative mapping of mammalian genomes. Nat Genet. 1997 Jan; 15(1):47-56.
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Johnson WE, O'Brien SJ. Phylogenetic reconstruction of the Felidae using 16S rRNA and NADH-5 mitochondrial genes. J Mol Evol. 1997; 44 Suppl 1:S98-116.
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Masuda R, Lopez JV, Slattery JP, Yuhki N, O'Brien SJ. Molecular phylogeny of mitochondrial cytochrome b and 12S rRNA sequences in the Felidae: ocelot and domestic cat lineages. Mol Phylogenet Evol. 1996 Dec; 6(3):351-65.
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Dean M, Carrington M, Goedert J, O'brien SJ. Participants in HIV Study: Correction. Science. 1996 Nov 15; 274(5290):1069a.
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Zhi L, Karesh WB, Janczewski DN, Frazier-Taylor H, Sajuthi D, Gombek F, Andau M, Martenson JS, O'Brien SJ. Genomic differentiation among natural populations of orang-utan (Pongo pygmaeus). Curr Biol. 1996 Oct 1; 6(10):1326-36.
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Carpenter MA, Brown EW, Culver M, Johnson WE, Pecon-Slattery J, Brousset D, O'Brien SJ. Genetic and phylogenetic divergence of feline immunodeficiency virus in the puma (Puma concolor). J Virol. 1996 Oct; 70(10):6682-93.
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O'Brien SJ, Goedert JJ. HIV causes AIDS: Koch's postulates fulfilled. Curr Opin Immunol. 1996 Oct; 8(5):613-8.
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Beck AR, Medley QG, O'Brien S, Anderson P, Streuli M. Structure, tissue distribution and genomic organization of the murine RRM-type RNA binding proteins TIA-1 and TIAR. Nucleic Acids Res. 1996 Oct 1; 24(19):3829-35.
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Callaway GH, O'Brien SJ, Tehrany AM. Chiari I malformation and spinal cord injury: cause for concern in contact athletes? Med Sci Sports Exerc. 1996 Oct; 28(10):1218-20.
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Dean M, Carrington M, Winkler C, Huttley GA, Smith MW, Allikmets R, Goedert JJ, Buchbinder SP, Vittinghoff E, Gomperts E, Donfield S, Vlahov D, Kaslow R, Saah A, Rinaldo C, Detels R, O'Brien SJ. Genetic restriction of HIV-1 infection and progression to AIDS by a deletion allele of the CKR5 structural gene. Hemophilia Growth and Development Study, Multicenter AIDS Cohort Study, Multicenter Hemophilia Cohort Study, San Francisco City Cohort, ALIVE Study. Science. 1996 Sep 27; 273(5283):1856-62.
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Hofmann-Lehmann R, Fehr D, Grob M, Elgizoli M, Packer C, Martenson JS, O'Brien SJ, Lutz H. Prevalence of antibodies to feline parvovirus, calicivirus, herpesvirus, coronavirus, and immunodeficiency virus and of feline leukemia virus antigen and the interrelationship of these viral infections in free-ranging lions in east Africa. Clin Diagn Lab Immunol. 1996 Sep; 3(5):554-62.
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Gusmer PB, Potter HG, Schatz JA, Wickiewicz TL, Altchek DW, O'Brien SJ, Warren RF. Labral injuries: accuracy of detection with unenhanced MR imaging of the shoulder. Radiology. 1996 Aug; 200(2):519-24.
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House C, Alexander KA, Kat PW, O'Brien SJ, Mangiafico J. Serum antibody to Rift Valley fever virus in African carnivores. Ann N Y Acad Sci. 1996 Jul 23; 791:345-9.
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Pagnani MJ, Deng XH, Warren RF, Torzilli PA, O'Brien SJ. Role of the long head of the biceps brachii in glenohumeral stability: a biomechanical study in cadavera. J Shoulder Elbow Surg. 1996 Jul-Aug; 5(4):255-62.
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Cheson BD, Bennett JM, Grever M, Kay N, Keating MJ, O'Brien S, Rai KR. National Cancer Institute-sponsored Working Group guidelines for chronic lymphocytic leukemia: revised guidelines for diagnosis and treatment. Blood. 1996 Jun 15; 87(12):4990-7.
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Debant A, Serra-Pagès C, Seipel K, O'Brien S, Tang M, Park SH, Streuli M. The multidomain protein Trio binds the LAR transmembrane tyrosine phosphatase, contains a protein kinase domain, and has separate rac-specific and rho-specific guanine nucleotide exchange factor domains. Proc Natl Acad Sci U S A. 1996 May 28; 93(11):5466-71.
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Lopez JV, Cevario S, O'Brien SJ. Complete nucleotide sequences of the domestic cat (Felis catus) mitochondrial genome and a transposed mtDNA tandem repeat (Numt) in the nuclear genome. Genomics. 1996 Apr 15; 33(2):229-46.
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Kaslow RA, Carrington M, Apple R, Park L, Muñoz A, Saah AJ, Goedert JJ, Winkler C, O'Brien SJ, Rinaldo C, Detels R, Blattner W, Phair J, Erlich H, Mann DL. Influence of combinations of human major histocompatibility complex genes on the course of HIV-1 infection. Nat Med. 1996 Apr; 2(4):405-11.
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Lachs MS, Williams C, O'Brien S, Hurst L, Horwitz R. Older adults. An 11-year longitudinal study of adult protective service use. Arch Intern Med. 1996 Feb 26; 156(4):449-53.
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Roelke-Parker ME, Munson L, Packer C, Kock R, Cleaveland S, Carpenter M, O'Brien SJ, Pospischil A, Hofmann-Lehmann R, Lutz H, Mwamengele GL, Mgasa MN, Machange GA, Summers BA, Appel MJ. A canine distemper virus epidemic in Serengeti lions (Panthera leo). Nature. 1996 Feb 1; 379(6564):441-5.
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Medley QG, Kedersha N, O'Brien S, Tian Q, Schlossman SF, Streuli M, Anderson P. Characterization of GMP-17, a granule membrane protein that moves to the plasma membrane of natural killer cells following target cell recognition. Proc Natl Acad Sci U S A. 1996 Jan 23; 93(2):685-9.
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Carpenter MA, O'Brien SJ. Coadaptation and immunodeficiency virus: lessons from the Felidae. Curr Opin Genet Dev. 1995 Dec; 5(6):739-45.
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Alexander KA, Kat PW, House J, House C, O'Brien SJ, Laurenson MK, McNutt JW, Osburn BI. African horse sickness and African carnivores. Vet Microbiol. 1995 Nov; 47(1-2):133-40.
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O'Brien SJ, Ngeow J, Gibney MA, Warren RF, Fealy S. Reflex sympathetic dystrophy of the knee. Causes, diagnosis, and treatment. Am J Sports Med. 1995 Nov-Dec; 23(6):655-9.
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Slattery JP, O'Brien SJ. Molecular phylogeny of the red panda (Ailurus fulgens). J Hered. 1995 Nov-Dec; 86(6):413-22.
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Wall MS, O'Brien SJ. Arthroscopic evaluation of the unstable shoulder. Clin Sports Med. 1995 Oct; 14(4):817-39.
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Field LD, Warren RF, O'Brien SJ, Altchek DW, Wickiewicz TL. Isolated closure of rotator interval defects for shoulder instability. Am J Sports Med. 1995 Sep-Oct; 23(5):557-63.
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Menotti-Raymond M, O'Brien SJ. Hypervariable genomic variation to reconstruct the natural history of populations: lessons from the big cats. Electrophoresis. 1995 Sep; 16(9):1771-4.
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Sacchi S, Kantarjian H, O'Brien S, Cohen PR, Pierce S, Talpaz M. Immune-mediated and unusual complications during interferon alfa therapy in chronic myelogenous leukemia. J Clin Oncol. 1995 Sep; 13(9):2401-7.
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O'Brien SJ. Genomic prospecting. Nat Med. 1995 Aug; 1(8):742-4.
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Potter HG, Hannafin JA, Morwessel RM, DiCarlo EF, O'Brien SJ, Altchek DW. Lateral epicondylitis: correlation of MR imaging, surgical, and histopathologic findings. Radiology. 1995 Jul; 196(1):43-6.
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Menotti-Raymond MA, O'Brien SJ. Evolutionary conservation of ten microsatellite loci in four species of Felidae. J Hered. 1995 Jul-Aug; 86(4):319-22.
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Field LD, Callaway GH, O'Brien SJ, Altchek DW. Arthroscopic assessment of the medial collateral ligament complex of the elbow. Am J Sports Med. 1995 Jul-Aug; 23(4):396-400.
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Janczewski DN, Modi WS, Stephens JC, O'Brien SJ. Molecular evolution of mitochondrial 12S RNA and cytochrome b sequences in the pantherine lineage of Felidae. Mol Biol Evol. 1995 Jul; 12(4):690-707.
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O'Brien SJ, Schwartz RS, Warren RF, Torzilli PA. Capsular restraints to anterior-posterior motion of the abducted shoulder: a biomechanical study. J Shoulder Elbow Surg. 1995 Jul-Aug; 4(4):298-308.
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Veltri DM, Pagnani MJ, O'Brien SJ, Warren RF, Ryan MD, Barnes RP. Symptomatic ossification of the tibiofibular syndesmosis in professional football players: a sequela of the syndesmotic ankle sprain. Foot Ankle Int. 1995 May; 16(5):285-90.
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Jordan K, O'Brien SJ, Johnson KH, O'Brien TD. Assignment of islet amyloid polypeptide (IAPP) gene to feline chromosome B4 using the polymerase chain reaction technique on feline-rodent hybrid cell lines. Vet Pathol. 1995 Mar; 32(2):195-7.
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Kantarjian HM, Smith TL, O'Brien S, Beran M, Pierce S, Talpaz M. Prolonged survival in chronic myelogenous leukemia after cytogenetic response to interferon-alpha therapy. The Leukemia Service. Ann Intern Med. 1995 Feb 15; 122(4):254-61.
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Field LD, Altchek DW, Warren RF, O'Brien SJ, Skyhar MJ, Wickiewicz TL. Arthroscopic anatomy of the lateral elbow: a comparison of three portals. Arthroscopy. 1994 Dec; 10(6):602-7.
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Seuánez HN, Alves G, O'Brien SJ. Gene mapping in the spider monkey (Ateles paniscus chamek). J Hered. 1994 Nov-Dec; 85(6):466-73.
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Alexander KA, MacLachlan NJ, Kat PW, House C, O'Brien SJ, Lerche NW, Sawyer M, Frank LG, Holekamp K, Smale L, et al. Evidence of natural bluetongue virus infection among African carnivores. Am J Trop Med Hyg. 1994 Nov; 51(5):568-76.
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Stephens JC, Briscoe D, O'Brien SJ. Mapping by admixture linkage disequilibrium in human populations: limits and guidelines. Am J Hum Genet. 1994 Oct; 55(4):809-24.
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Slattery JP, Johnson WE, Goldman D, O'Brien SJ. Phylogenetic reconstruction of South American felids defined by protein electrophoresis. J Mol Evol. 1994 Sep; 39(3):296-305.
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Brown EW, Yuhki N, Packer C, O'Brien SJ. A lion lentivirus related to feline immunodeficiency virus: epidemiologic and phylogenetic aspects. J Virol. 1994 Sep; 68(9):5953-68.
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Langley RJ, Hirsch VM, O'Brien SJ, Adger-Johnson D, Goeken RM, Olmsted RA. Nucleotide sequence analysis of puma lentivirus (PLV-14): genomic organization and relationship to other lentiviruses. Virology. 1994 Aug 1; 202(2):853-64.
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Hoelzel AR, Lopez JV, Dover GA, O'Brien SJ. Rapid evolution of a heteroplasmic repetitive sequence in the mitochondrial DNA control region of carnivores. J Mol Evol. 1994 Aug; 39(2):191-9.
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Lopez JV, Yuhki N, Masuda R, Modi W, O'Brien SJ. Numt, a recent transfer and tandem amplification of mitochondrial DNA to the nuclear genome of the domestic cat. J Mol Evol. 1994 Aug; 39(2):174-90.
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Yuhki N, O'Brien SJ. Exchanges of short polymorphic DNA segments predating speciation in feline major histocompatibility complex class I genes. J Mol Evol. 1994 Jul; 39(1):22-33.
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O'Brien SJ. A role for molecular genetics in biological conservation. Proc Natl Acad Sci U S A. 1994 Jun 21; 91(13):5748-55.
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Veltri DM, Warren RF, Wickiewicz TL, O'Brien SJ. Current status of allograft meniscal transplantation. Clin Orthop Relat Res. 1994 Jun; (303):44-55.
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Laurencin CT, Deutsch A, O'Brien SJ, Altchek DW. The superolateral portal for arthroscopy of the shoulder. Arthroscopy. 1994 Jun; 10(3):255-8.
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Glavac D, Ravnik-Glavac M, O'Brien SJ, Dean M. Polymorphisms in the 3' untranslated region of the I kappa B/MAD-3 (NFKBI) gene located on chromosome 14. Hum Genet. 1994 Jun; 93(6):694-6.
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O'Brien SJ, Pan W, Lu Z. Pandas, people and policy. Nature. 1994 May 19; 369(6477):179-80.
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O'Brien S, Kantarjian H, Estey E, Koller C, Robertson B, Beran M, Andreeff M, Pierce S, Keating M. Lack of effect of 2-chlorodeoxyadenosine therapy in patients with chronic lymphocytic leukemia refractory to fludarabine therapy. N Engl J Med. 1994 Feb 3; 330(5):319-22.
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Briscoe D, Stephens JC, O'Brien SJ. Linkage disequilibrium in admixed populations: applications in gene mapping. J Hered. 1994 Jan-Feb; 85(1):59-63.
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O'Brien SJ. Genetic and phylogenetic analyses of endangered species. Annu Rev Genet. 1994; 28:467-89.
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O'Brien SJ, Clegg MT. Genomes and evolution. Curr Opin Genet Dev. 1993 Dec; 3(6):835-6.
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Anagnou NP, Seuanez H, Modi W, O'Brien SJ, Papamatheakis J, Moschonas NK. Chromosomal mapping of two members of the human glutamate dehydrogenase (GLUD) gene family to chromosomes 10q22.3-q23 and Xq22-q23. Hum Hered. 1993 Nov-Dec; 43(6):351-6.
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Hoelzel AR, Halley J, O'Brien SJ, Campagna C, Arnbom T, Le Boeuf B, Ralls K, Dover GA. Elephant seal genetic variation and the use of simulation models to investigate historical population bottlenecks. J Hered. 1993 Nov-Dec; 84(6):443-9.
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Tsujimoto H, Fulton R, Nishigaki K, Matsumoto Y, Hasegawa A, Tsujimoto A, Cevario S, O'Brien SJ, Terry A, Onions D, et al. A common proviral integration region, fit-1, in T-cell tumors induced by myc-containing feline leukemia viruses. Virology. 1993 Oct; 196(2):845-8.
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Okuda M, Umeda A, Matsumoto Y, Momoi Y, Watari T, Goitsuka R, O'Brien SJ, Tsujimoto H, Hasegawa A. Molecular cloning and chromosomal mapping of feline p53 tumor suppressor gene. J Vet Med Sci. 1993 Oct; 55(5):801-5.
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Rodeo SA, Warren RF, O'Brien SJ, Pavlov H, Barnes R, Hanks GA. Diastasis of bipartite sesamoids of the first metatarsophalangeal joint. Foot Ankle. 1993 Oct; 14(8):425-34.
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O'Brien S, Kantarjian H, Beran M, Smith T, Koller C, Estey E, Robertson LE, Lerner S, Keating M. Results of fludarabine and prednisone therapy in 264 patients with chronic lymphocytic leukemia with multivariate analysis-derived prognostic model for response to treatment. Blood. 1993 Sep 15; 82(6):1695-700.
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Baker CS, Gilbert DA, Weinrich MT, Lambertsen R, Calambokidis J, McArdle B, Chambers GK, O'Brien SJ. Population characteristics of DNA fingerprints in humpback whales (Megaptera novaeangliae). J Hered. 1993 Jul-Aug; 84(4):281-90.
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Pagnani MJ, Warner JJ, O'Brien SJ, Warren RF. Anatomic considerations in harvesting the semitendinosus and gracilis tendons and a technique of harvest. Am J Sports Med. 1993 Jul-Aug; 21(4):565-71.
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Keating MJ, O'Brien S, Kantarjian H, Plunkett W, Estey E, Koller C, Beran M, Freireich EJ. Long-term follow-up of patients with chronic lymphocytic leukemia treated with fludarabine as a single agent. Blood. 1993 Jun 1; 81(11):2878-84.
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Roelke ME, Martenson JS, O'Brien SJ. The consequences of demographic reduction and genetic depletion in the endangered Florida panther. Curr Biol. 1993 Jun 1; 3(6):340-50.
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Donoghue AM, Johnston LA, Goodrowe KL, O'Brien SJ, Wildt DE. Influence of day of oestrus on egg viability and comparative efficiency of in vitro fertilization in domestic cats in natural or gonadotrophin-induced oestrus. J Reprod Fertil. 1993 May; 98(1):85-90.
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Menotti-Raymond M, O'Brien SJ. Dating the genetic bottleneck of the African cheetah. Proc Natl Acad Sci U S A. 1993 Apr 15; 90(8):3172-6.
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Cooper DE, O'Brien SJ, Warren RF. Supporting layers of the glenohumeral joint. An anatomic study. Clin Orthop Relat Res. 1993 Apr; (289):144-55.
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Hodge JC, Ghelman B, O'Brien SJ, Wickiewicz TL. Synovial plicae and chondromalacia patellae: correlation of results of CT arthrography with results of arthroscopy. Radiology. 1993 Mar; 186(3):827-31.
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O'Brien SJ, Womack JE, Lyons LA, Moore KJ, Jenkins NA, Copeland NG. Anchored reference loci for comparative genome mapping in mammals. Nat Genet. 1993 Feb; 3(2):103-12.
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Goldman D, O'Brien SJ. Two-dimensional protein electrophoresis in phylogenetic studies. Methods Enzymol. 1993; 224:113-21.
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Brown JL, Bush M, Packer C, Pusey AE, Monfort SL, O'Brien SJ, Janssen DL, Wildt DE. Hormonal characteristics of free-ranging female lions (Panthera leo) of the Serengeti Plains and Ngorongoro Crater. J Reprod Fertil. 1993 Jan; 97(1):107-14.
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Sobel M, Bohne WH, O'Brien SJ. Peroneal tendon subluxation in a case of anomalous peroneus brevis muscle. Acta Orthop Scand. 1992 Dec; 63(6):682-4.
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Janczewski DN, Yuhki N, Gilbert DA, Jefferson GT, O'Brien SJ. Molecular phylogenetic inference from saber-toothed cat fossils of Rancho La Brea. Proc Natl Acad Sci U S A. 1992 Oct 15; 89(20):9769-73.
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Kelley MJ, Pech M, Seuanez HN, Rubin JS, O'Brien SJ, Aaronson SA. Emergence of the keratinocyte growth factor multigene family during the great ape radiation. Proc Natl Acad Sci U S A. 1992 Oct 1; 89(19):9287-91.
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Jackson CE, Yuhki N, Desnick RJ, Haskins ME, O'Brien SJ, Schuchman EH. Feline arylsulfatase B (ARSB): isolation and expression of the cDNA, comparison with human ARSB, and gene localization to feline chromosome A1. Genomics. 1992 Oct; 14(2):403-11.
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Paletta GA, Levine DS, O'Brien SJ, Wickiewicz TL, Warren RF. Patterns of meniscal injury associated with acute anterior cruciate ligament injury in skiers. Am J Sports Med. 1992 Sep-Oct; 20(5):542-7.
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Lautenberger JA, Burdett LA, Gunnell MA, Qi S, Watson DK, O'Brien SJ, Papas TS. Genomic dispersal of the ets gene family during metazoan evolution. Oncogene. 1992 Sep; 7(9):1713-9.
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Stephens JC, Gilbert DA, Yuhki N, O'Brien SJ. Estimation of heterozygosity for single-probe multilocus DNA fingerprints. Mol Biol Evol. 1992 Jul; 9(4):729-43.
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O'Brien SJ, Mann DL. Adaptive chaos and AIDS. Curr Biol. 1992 Apr; 2(4):203-5.
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White MB, Carvalho M, Derse D, O'Brien SJ, Dean M. Detecting single base substitutions as heteroduplex polymorphisms. Genomics. 1992 Feb; 12(2):301-6.
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Arnoczky SP, DiCarlo EF, O'Brien SJ, Warren RF. Cellular repopulation of deep-frozen meniscal autografts: an experimental study in the dog. Arthroscopy. 1992; 8(4):428-36.
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Dionne CA, Modi WS, Crumley G, O'Brien SJ, Schlessinger J, Jaye M. BEK, a receptor for multiple members of the fibroblast growth factor (FGF) family, maps to human chromosome 10q25.3----q26. Cytogenet Cell Genet. 1992; 60(1):34-6.
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Cooper DE, Arnoczky SP, O'Brien SJ, Warren RF, DiCarlo E, Allen AA. Anatomy, histology, and vascularity of the glenoid labrum. An anatomical study. J Bone Joint Surg Am. 1992 Jan; 74(1):46-52.
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Johnston LA, Donoghue AM, O'Brien SJ, Wildt DE. Rescue and maturation in vitro of follicular oocytes collected from nondomestic felid species. Biol Reprod. 1991 Dec; 45(6):898-906.
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Goldman D, O'Brien SJ, Lucas-Derse S, Dean M. Linkage mapping of human polymorphic proteins identified by two-dimensional electrophoresis. Genomics. 1991 Dec; 11(4):875-84.
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Masuda R, Yuhki N, O'Brien SJ. Molecular cloning, chromosomal assignment, and nucleotide sequence of the feline homeobox HOX3A. Genomics. 1991 Dec; 11(4):1007-13.
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Levine MA, Modi WS, O'Brien SJ. Mapping of the gene encoding the alpha subunit of the stimulatory G protein of adenylyl cyclase (GNAS1) to 20q13.2----q13.3 in human by in situ hybridization. Genomics. 1991 Oct; 11(2):478-9.
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Gilbert DA, Packer C, Pusey AE, Stephens JC, O'Brien SJ. Analytical DNA fingerprinting in lions: parentage, genetic diversity, and kinship. J Hered. 1991 Sep-Oct; 82(5):378-86.
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Dean M, Lucas-Derse S, Bolos A, O'Brien SJ, Kirkness EF, Fraser CM, Goldman D. Genetic mapping of the beta 1 GABA receptor gene to human chromosome 4, using a tetranucleotide repeat polymorphism. Am J Hum Genet. 1991 Sep; 49(3):621-6.
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O'Brien SJ. Ghetto legacy. Curr Biol. 1991 Aug; 1(4):209-11.
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Poduslo SE, Dean M, Kolch U, O'Brien SJ. Detecting high-resolution polymorphisms in human coding loci by combining PCR and single-strand conformation polymorphism (SSCP) analysis. Am J Hum Genet. 1991 Jul; 49(1):106-11.
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Johnston LA, Donoghue AM, O'Brien SJ, Wildt DE. Influence of temperature and gas atmosphere on in-vitro fertilization and embryo development in domestic cats. J Reprod Fertil. 1991 Jul; 92(2):377-82.
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O'Brien SJ. Mammalian genome mapping: lessons and prospects. Curr Opin Genet Dev. 1991 Jun; 1(1):105-11.
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Frolova EI, Dolganov GM, Mazo IA, Smirnov DV, Copeland P, Stewart C, O'Brien SJ, Dean M. Linkage mapping of the human CSF2 and IL3 genes. Proc Natl Acad Sci U S A. 1991 Jun 1; 88(11):4821-4.
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Wayne RK, Van Valkenburgh B, O'Brien SJ. Molecular distance and divergence time in carnivores and primates. Mol Biol Evol. 1991 May; 8(3):297-319.
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Wildt DE, Bush M, O'Brien SJ, Murray ND, Taylor A, Graves JA. Semen characteristics in free-living koalas (Phascolarctos cinereus). J Reprod Fertil. 1991 May; 92(1):99-107.
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Johnston LA, Donoghue AM, O'Brien SJ, Wildt DE. Culture medium and protein supplementation influence in vitro fertilization and embryo development in the domestic cat. J Exp Zool. 1991 Mar; 257(3):350-9.
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O'Brien SJ, Warren RF, Pavlov H, Panariello R, Wickiewicz TL. Reconstruction of the chronically insufficient anterior cruciate ligament with the central third of the patellar ligament. J Bone Joint Surg Am. 1991 Feb; 73(2):278-86.
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O'Brien SJ, Warren RF, Wickiewicz TL, Rawlins BA, Allen AA, Panariello R, Kelly AM. The iliotibial band lateral sling procedure and its effect on the results of anterior cruciate ligament reconstruction. Am J Sports Med. 1991 Jan-Feb; 19(1):21-4; discussion 24-5.
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Gutin B, Warren R, Wickiewicz T, O'Brien S, Altchek D, Kroll M. Does tourniquet use during anterior cruciate ligament surgery interfere with postsurgical recovery of function? A review of the literature. Arthroscopy. 1991; 7(1):52-6.
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Keating MJ, Kantarjian H, O'Brien S, Koller C, Talpaz M, Schachner J, Childs CC, Freireich EJ, McCredie KB. Fludarabine: a new agent with marked cytoreductive activity in untreated chronic lymphocytic leukemia. J Clin Oncol. 1991 Jan; 9(1):44-9.
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Gardner MB, Kozak CA, O'Brien SJ. The Lake Casitas wild mouse: evolving genetic resistance to retroviral disease. Trends Genet. 1991 Jan; 7(1):22-7.
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Brown JL, Bush M, Packer C, Pusey AE, Monfort SL, O'Brien SJ, Janssen DL, Wildt DE. Developmental changes in pituitary-gonadal function in free-ranging lions (Panthera leo leo) of the Serengeti Plains and Ngorongoro Crater. J Reprod Fertil. 1991 Jan; 91(1):29-40.
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Bush M, Graves J, O'Brien SJ, Wildt DE. Dissociative anaesthesia in free-ranging male koalas and selected marsupials in captivity. Aust Vet J. 1990 Dec; 67(12):449-51.
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Miller MD, Wilson SD, Dorf ME, Seuanez HN, O'Brien SJ, Krangel MS. Sequence and chromosomal location of the I-309 gene. Relationship to genes encoding a family of inflammatory cytokines. J Immunol. 1990 Oct 15; 145(8):2737-44.
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Levine MA, Modi WS, O'Brien SJ. Chromosomal localization of the genes encoding two forms of the G protein beta polypeptide, beta 1 and beta 3, in man. Genomics. 1990 Oct; 8(2):380-6.
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O'Brien SJ, Neves MC, Arnoczky SP, Rozbruck SR, Dicarlo EF, Warren RF, Schwartz R, Wickiewicz TL. The anatomy and histology of the inferior glenohumeral ligament complex of the shoulder. Am J Sports Med. 1990 Sep-Oct; 18(5):449-56.
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Gilbert DA, Reid YA, Gail MH, Pee D, White C, Hay RJ, O'Brien SJ. Application of DNA fingerprints for cell-line individualization. Am J Hum Genet. 1990 Sep; 47(3):499-514.
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Janczewski DN, Goldman D, O'Brien SJ. Molecular genetic divergence of orang utan (Pongo pygmaeus) subspecies based on isozyme and two-dimensional gel electrophoresis. J Hered. 1990 Sep-Oct; 81(5):375-87.
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Yuhki N, O'Brien SJ. DNA recombination and natural selection pressure sustain genetic sequence diversity of the feline MHC class I genes. J Exp Med. 1990 Aug 1; 172(2):621-30.
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Halverson D, Modi W, Dean M, Gelmann EP, Dunn KJ, Clanton D, Oskarsson M, O'Brien SJ, Blair DG. An oncogenic chromosome 8-9 gene fusion isolated following transfection of human ovarian carcinoma cell line DNA. Oncogene. 1990 Jul; 5(7):1085-9.
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Rodeo SA, O'Brien S, Warren RF, Barnes R, Wickiewicz TL, Dillingham MF. Turf-toe: an analysis of metatarsophalangeal joint sprains in professional football players. Am J Sports Med. 1990 May-Jun; 18(3):280-5.
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Gilbert DA, Lehman N, O'Brien SJ, Wayne RK. Genetic fingerprinting reflects population differentiation in the California Channel Island fox. Nature. 1990 Apr 19; 344(6268):764-7.
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Baker CS, Palumbi SR, Lambertsen RH, Weinrich MT, Calambokidis J, O'Brien SJ. Influence of seasonal migration on geographic distribution of mitochondrial DNA haplotypes in humpback whales. Nature. 1990 Mar 15; 344(6263):238-40.
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Wayne RK, Meyer A, Lehman N, Van Valkenburgh B, Kat PW, Fuller TK, Girman D, O'Brien SJ. Large sequence divergence among mitochondrial DNA genotypes within populations of eastern African black-backed jackals. Proc Natl Acad Sci U S A. 1990 Mar; 87(5):1772-6.
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O'Brien SJ, Miller DV. The contact neodymium-yttrium aluminum garnet laser. A new approach to arthroscopic laser surgery. Clin Orthop Relat Res. 1990 Mar; (252):95-100.
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Yuhki N, O'Brien SJ. DNA variation of the mammalian major histocompatibility complex reflects genomic diversity and population history. Proc Natl Acad Sci U S A. 1990 Jan; 87(2):836-40.
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Modi WS, Dean M, Seuanez HN, Mukaida N, Matsushima K, O'Brien SJ. Monocyte-derived neutrophil chemotactic factor (MDNCF/IL-8) resides in a gene cluster along with several other members of the platelet factor 4 gene superfamily. Hum Genet. 1990 Jan; 84(2):185-7.
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Johnston LA, O'Brien SJ, Wildt DE. In vitro maturation and fertilization of domestic cat follicular oocytes. Gamete Res. 1989 Nov; 24(3):343-56.
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Modi WS, Levine MA, Seuanez HN, Dean M, O'Brien SJ. The human chromogranin A gene: chromosome assignment and RFLP analysis. Am J Hum Genet. 1989 Nov; 45(5):814-8.
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Wayne RK, Van Valkenburgh B, Kat PW, Fuller TK, Johnson WE, O'Brien SJ. Genetic and morphological divergence among sympatric canids. J Hered. 1989 Nov-Dec; 80(6):447-54.
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Reeves RH, Gearhart JD, Hecht NB, Yelick P, Johnson P, O'Brien SJ. Mapping of PRM1 to human chromosome 16 and tight linkage of Prm-1 and Prm-2 on mouse chromosome 16. J Hered. 1989 Nov-Dec; 80(6):442-6.
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Giri PR, Krug JF, Kozak C, Moretti T, O'Brien SJ, Seuanez HN, Goldman D. Cloning and comparative mapping of a human class III (chi) alcohol dehydrogenase cDNA. Biochem Biophys Res Commun. 1989 Oct 16; 164(1):453-60.
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Hentze MW, Seuanez HN, O'Brien SJ, Harford JB, Klausner RD. Chromosomal localization of nucleic acid-binding proteins by affinity mapping: assignment of the IRE-binding protein gene to human chromosome 9. Nucleic Acids Res. 1989 Aug 11; 17(15):6103-8.
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Anagnou NP, Economou-Pachnis A, O'Brien SJ, Modi WS, Nienhuis AW, Tsichlis PN. The human homolog of the Moloney leukemia virus integration 2 locus (MLV12) maps to band p14 of chromosome 5. Genomics. 1989 Aug; 5(2):354-8.
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Mock B, Kozak C, Seldin MF, Ruff N, D'Hoostelaere L, Szpirer C, Levan G, Seuanez H, O'Brien S, Banner C. A glutaminase (gis) gene maps to mouse chromosome 1, rat chromosome 9, and human chromosome 2. Genomics. 1989 Aug; 5(2):291-7.
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Mann DL, O'Brien SJ, Gilbert DA, Reid Y, Popovic M, Read-Connole E, Gallo RC, Gazdar AF. Origin of the HIV-susceptible human CD4+ cell line H9. AIDS Res Hum Retroviruses. 1989 Jun; 5(3):253-5.
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Yuhki N, Heidecker GF, O'Brien SJ. Characterization of MHC cDNA clones in the domestic cat. Diversity and evolution of class I genes. J Immunol. 1989 May 15; 142(10):3676-82.
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Evermann JF, Heeney JL, McKeirnan AJ, O'Brien SJ. Comparative features of a coronavirus isolated from a cheetah with feline infectious peritonitis. Virus Res. 1989 May; 13(1):15-27.
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Schuchman EH, O'Brien SJ, Desnick RJ. Assignment of the feline alpha-L-iduronidase gene to chromosome D4. Genomics. 1989 Apr; 4(3):442-4.
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Warren RF, O'Brien SJ. Approaches to senior care #7. Shoulder pain in the geriatric patient. Part II. Treatment options. Orthop Rev. 1989 Feb; 18(2):248-53, 256-63.
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Winkler C, Schultz A, Cevario S, O'Brien S. Genetic characterization of FLA, the cat major histocompatibility complex. Proc Natl Acad Sci U S A. 1989 Feb; 86(3):943-7.
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Rojko JL, Kociba GJ, Abkowitz JL, Hamilton KL, Hardy WD, Ihle JN, O'Brien SJ. Feline lymphomas: immunological and cytochemical characterization. Cancer Res. 1989 Jan 15; 49(2):345-51.
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Modi WS, Seuànez HN, Jaye M, Haigler HJ, Kaplan R, O'Brien SJ. The human endonexin II (ENX2) gene is located at 4q28----q32. Cytogenet Cell Genet. 1989; 52(3-4):167-9.
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Dean M, Stewart C, Perry A, Gerrard B, Beck T, Rapp U, Drumm M, Iannuzzi M, Collins F, O'Brien S. Genetic markers for oncogenes, growth factors, and cystic fibrosis. Haematol Blood Transfus. 1989; 32:360-5.
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Warren RF, O'Brien SJ. Approaches to senior care #6. Shoulder pain in the geriatric patient. Part I. Evaluation and pathophysiology. Orthop Rev. 1989 Jan; 18(1):129-35.
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Lalley PA, Davison MT, Graves JA, O'Brien SJ, Womack JE, Roderick TH, Creau-Goldberg N, Hillyard AL, Doolittle DP, Rogers JA. Report of the committee on comparative mapping. Cytogenet Cell Genet. 1989; 51(1-4):503-32.
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Miller DV, O'Brien SJ, Arnoczky SS, Kelly A, Fealy SV, Warren RF. The use of the contact Nd:YAG laser in arthroscopic surgery: effects on articular cartilage and meniscal tissue. Arthroscopy. 1989; 5(4):245-53.
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Sack GH, Talbot CC, Seuanez H, O'Brien SJ. Molecular analysis of the human serum amyloid A (SAA) gene family. Scand J Immunol. 1989 Jan; 29(1):113-9.
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Weissman AM, Hou D, Orloff DG, Modi WS, Seuanez H, O'Brien SJ, Klausner RD. Molecular cloning and chromosomal localization of the human T-cell receptor zeta chain: distinction from the molecular CD3 complex. Proc Natl Acad Sci U S A. 1988 Dec; 85(24):9709-13.
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Rao VN, Modi WS, Drabkin HD, Patterson D, O'Brien SJ, Papas TS, Reddy ES. The human erg gene maps to chromosome 21, band q22: relationship to the 8; 21 translocation of acute myelogenous leukemia. Oncogene. 1988 Nov; 3(5):497-500.
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Goodrowe KL, Wall RJ, O'Brien SJ, Schmidt PM, Wildt DE. Developmental competence of domestic cat follicular oocytes after fertilization in vitro. Biol Reprod. 1988 Sep; 39(2):355-72.
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Ruppert JM, Kinzler KW, Wong AJ, Bigner SH, Kao FT, Law ML, Seuanez HN, O'Brien SJ, Vogelstein B. The GLI-Kruppel family of human genes. Mol Cell Biol. 1988 Aug; 8(8):3104-13.
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Powell SE, O'Brien SJ, Barnes R, Warren RF, Wickiewicz TL. Quinine-induced thrombocytopenia. A case report. J Bone Joint Surg Am. 1988 Aug; 70(7):1097-9.
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Cammisa FP, O'Brien SJ, Salvati EA, Sculco TP, Wilson PD, Ranawat CS, Pellicci PM, Inglis AE. One-stage bilateral total hip arthroplasty. A prospective study of perioperative morbidity. Orthop Clin North Am. 1988 Jul; 19(3):657-68.
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Modi WS, Masuda A, Yamada M, Oppenheim JJ, Matsushima K, O'Brien SJ. Chromosomal localization of the human interleukin 1 alpha (IL-1 alpha) gene. Genomics. 1988 May; 2(4):310-4.
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Gilbert DA, O'Brien JS, O'Brien SJ. Chromosomal mapping of lysosomal enzyme structural genes in the domestic cat. Genomics. 1988 May; 2(4):329-36.
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Bach BR, O'Brien SJ, Warren RF, Leighton M. An unusual neurological complication of the Bristow procedure. A case report. J Bone Joint Surg Am. 1988 Mar; 70(3):458-60.
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O'Brien SJ, Warren RF, Gollehon D. Intra-articular fracture of the femur mimicking insufficiency of the posterior cruciate ligament. A case report. J Bone Joint Surg Am. 1988 Mar; 70(3):461-2.
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Anagnou NP, Antonarakis SE, O'Brien SJ, Modi WS, Nienhuis AW. Chromosomal localization and racial distribution of the polymorphic human dihydrofolate reductase pseudogene (DHFRP1). Am J Hum Genet. 1988 Feb; 42(2):345-52.
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Yuhki N, O'Brien SJ. Molecular characterization and genetic mapping of class I and class II MHC genes of the domestic cat. Immunogenetics. 1988; 27(6):414-25.
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O'Brien SJ, Seuánez HN, Womack JE. Mammalian genome organization: an evolutionary view. Annu Rev Genet. 1988; 22:323-51.
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Beran M, O'Brien S, Gutterman JU, McCredie KB. Tumor necrosis factor and human hematopoiesis: I. Kinetics and diversity of human bone marrow cell response to recombinant tumor necrosis factor alpha in short-term suspension cultures in vitro. Hematol Pathol. 1988; 2(1):31-42.
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Modi WS, Fanning TG, Wayne RK, O'Brien SJ. Chromosomal localization of satellite DNA sequences among 22 species of felids and canids (Carnivora). Cytogenet Cell Genet. 1988; 48(4):208-13.
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Evermann JF, Heeney JL, Roelke ME, McKeirnan AJ, O'Brien SJ. Biological and pathological consequences of feline infectious peritonitis virus infection in the cheetah. Arch Virol. 1988; 102(3-4):155-71.
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Fanning TG, Modi WS, Wayne RK, O'Brien SJ. Evolution of heterochromatin-associated satellite DNA loci in felids and canids (Carnivora). Cytogenet Cell Genet. 1988; 48(4):214-9.
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Skyhar MJ, Altchek DW, Warren RF, Wickiewicz TL, O'Brien SJ. Shoulder arthroscopy with the patient in the beach-chair position. Arthroscopy. 1988; 4(4):256-9.
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Killen PD, Francomano CA, Yamada Y, Modi WS, O'Brien SJ. Partial structure of the human alpha 2(IV) collagen chain and chromosomal localization of the gene (COL4A2). Hum Genet. 1987 Dec; 77(4):318-24.
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O'Brien SJ. The ancestry of the giant panda. Sci Am. 1987 Nov; 257(5):102-7.
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Dean M, Kozak C, Robbins J, Callahan R, O'Brien S, Vande Woude GF. Chromosomal localization of the met proto-oncogene in the mouse and cat genome. Genomics. 1987 Oct; 1(2):167-73.
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Jaye M, Modi WS, Ricca GA, Mudd R, Chiu IM, O'Brien SJ, Drohan WN. Isolation of a cDNA clone for the human laminin-B1 chain and its gene localization. Am J Hum Genet. 1987 Oct; 41(4):605-15.
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el Awady MK, Kaplan JB, O'Brien SJ, Burk RD. Molecular analysis of integrated human papillomavirus 16 sequences in the cervical cancer cell line SiHa. Virology. 1987 Aug; 159(2):389-98.
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Anagnou NP, Antonarakis SE, O'Brien SJ, Nienhuis AW. A novel form of human polymorphism involving the hDHFR-psi 1 pseudogene identifies three RFLPs. Nucleic Acids Res. 1987 Jul 10; 15(13):5501.
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O'Brien SJ, Warren RF, Schwartz E. Anterior shoulder instability. Orthop Clin North Am. 1987 Jul; 18(3):395-408.
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Modi WS, Nash WG, Ferrari AC, O'Brien SJ. Cytogenetic methodologies for gene mapping and comparative analyses in mammalian cell culture systems. Gene Anal Tech. 1987 Jul-Aug; 4(4):75-85.
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Schwartz E, Warren RF, O'Brien SJ, Fronek J. Posterior shoulder instability. Orthop Clin North Am. 1987 Jul; 18(3):409-19.
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Kamholz J, Spielman R, Gogolin K, Modi W, O'Brien S, Lazzarini R. The human myelin-basic-protein gene: chromosomal localization and RFLP analysis. Am J Hum Genet. 1987 Apr; 40(4):365-73.
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Epstein ND, Karlsson S, O'Brien S, Modi W, Moulton A, Nienhuis AW. A new moderately repetitive DNA sequence family of novel organization. Nucleic Acids Res. 1987 Mar 11; 15(5):2327-41.
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Wildt DE, O'Brien SJ, Howard JG, Caro TM, Roelke ME, Brown JL, Bush M. Similarity in ejaculate-endocrine characteristics in captive versus free-ranging cheetahs of two subspecies. Biol Reprod. 1987 Mar; 36(2):351-60.
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Wayne RK, Nash WG, O'Brien SJ. Chromosomal evolution of the Canidae. I. Species with high diploid numbers. Cytogenet Cell Genet. 1987; 44(2-3):123-33.
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Lalley PA, O'Brien SJ, Créau-Goldberg N, Davisson MT, Roderick TH, Echard G, Womack JE, Graves JM, Doolittle DP, Guidi JN. Report on the committee on comparative mapping. Cytogenet Cell Genet. 1987; 46(1-4):367-89.
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Nash WG, O'Brien SJ. A comparative chromosome banding analysis of the Ursidae and their relationship to other carnivores. Cytogenet Cell Genet. 1987; 45(3-4):206-12.
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Wayne RK, Nash WG, O'Brien SJ. Chromosomal evolution of the Canidae. II. Divergence from the primitive carnivore karyotype. Cytogenet Cell Genet. 1987; 44(2-3):134-41.
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O'Brien SJ, Wildt DE, Bush M, Caro TM, FitzGibbon C, Aggundey I, Leakey RE. East African cheetahs: evidence for two population bottlenecks? Proc Natl Acad Sci U S A. 1987 Jan; 84(2):508-11.
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O'Brien SJ, Haskins ME, Winkler CA, Nash WG, Patterson DF. Chromosomal mapping of beta-globin and albino loci in the domestic cat. A conserved mammalian chromosome group. J Hered. 1986 Nov-Dec; 77(6):374-8.
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Seigel LJ, Nash WG, Poiesz BJ, Moore JL, O'Brien SJ. Dynamic and nonspecific dispersal of human T-cell leukemia/lymphoma virus type-I integration in cultured lymphoma cells. Virology. 1986 Oct 15; 154(1):67-75.
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Hentze MW, Keim S, Papadopoulos P, O'Brien S, Modi W, Drysdale J, Leonard WJ, Harford JB, Klausner RD. Cloning, characterization, expression, and chromosomal localization of a human ferritin heavy-chain gene. Proc Natl Acad Sci U S A. 1986 Oct; 83(19):7226-30.
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Steele PE, Martin MA, Rabson AB, Bryan T, O'Brien SJ. Amplification and chromosomal dispersion of human endogenous retroviral sequences. J Virol. 1986 Sep; 59(3):545-50.
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Jaye M, Howk R, Burgess W, Ricca GA, Chiu IM, Ravera MW, O'Brien SJ, Modi WS, Maciag T, Drohan WN. Human endothelial cell growth factor: cloning, nucleotide sequence, and chromosome localization. Science. 1986 Aug 1; 233(4763):541-5.
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Brownell E, Kozak CA, Fowle JR, Modi WS, Rice NR, O'Brien SJ. Comparative genetic mapping of cellular rel sequences in man, mouse, and the domestic cat. Am J Hum Genet. 1986 Aug; 39(2):194-202.
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Watson DK, Sacchi N, McWilliams-Smith MJ, O'Brien SJ, Papas TS. The avian and mammalian ets genes: molecular characterization, chromosome mapping, and implication in human leukemia. Anticancer Res. 1986 Jul-Aug; 6(4):631-6.
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Park M, Dean M, Cooper CS, Schmidt M, O'Brien SJ, Blair DG, Vande Woude GF. Mechanism of met oncogene activation. Cell. 1986 Jun 20; 45(6):895-904.
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Seigel LJ, Ratner L, Josephs SF, Derse D, Feinberg MB, Reyes GR, O'Brien SJ, Wong-Staal F. Transactivation induced by human T-lymphotropic virus type III (HTLV III) maps to a viral sequence encoding 58 amino acids and lacks tissue specificity. Virology. 1986 Jan 15; 148(1):226-31.
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Papas TS, Watson DK, Sacchi N, O'Brien SJ, Ascione R. Molecular evolution of ets genes from avians to mammals and their cytogenetic localization to regions involved in leukemia. Gene Amplif Anal. 1986; 4:207-38.
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Surti U, Szulman AE, Wagner K, Leppert M, O'Brien SJ. Tetraploid partial hydatidiform moles: two cases with a triple paternal contribution and a 92,XXXY karyotype. Hum Genet. 1986 Jan; 72(1):15-21.
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Berman EJ, Nash WG, Seuánez HN, O'Brien SJ. Chromosomal mapping of enzyme loci in the domestic cat: GSR to C2, ADA and ITPA to A3, and LDHA-ACP2 to D1. Cytogenet Cell Genet. 1986; 41(2):114-20.
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Brownell E, O'Brien SJ, Nash WG, Rice N. Genetic characterization of human c-rel sequences. Mol Cell Biol. 1985 Oct; 5(10):2826-31.
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Reeves RH, Nash WG, O'Brien SJ. Genetic mapping of endogenous RD-114 retroviral sequences of domestic cats. J Virol. 1985 Oct; 56(1):303-6.
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Nienhuis AW, Bunn HF, Turner PH, Gopal TV, Nash WG, O'Brien SJ, Sherr CJ. Expression of the human c-fms proto-oncogene in hematopoietic cells and its deletion in the 5q- syndrome. Cell. 1985 Sep; 42(2):421-8.
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Goldman D, Goldin LR, Rathnagiri P, O'Brien SJ, Egeland JA, Merril CR. Twenty-seven protein polymorphisms by two-dimensional electrophoresis of serum, erythrocytes, and fibroblasts in two pedigrees. Am J Hum Genet. 1985 Sep; 37(5):898-911.
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O'Brien SJ, Nash WG, Wildt DE, Bush ME, Benveniste RE. A molecular solution to the riddle of the giant panda's phylogeny. Nature. 1985 Sep 12-18; 317(6033):140-4.
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O'Brien SJ, Roelke ME, Marker L, Newman A, Winkler CA, Meltzer D, Colly L, Evermann JF, Bush M, Wildt DE. Genetic basis for species vulnerability in the cheetah. Science. 1985 Mar 22; 227(4693):1428-34.
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Burk RD, Szabo P, O'Brien S, Nash WG, Yu L, Smith KD. Organization and chromosomal specificity of autosomal homologs of human Y chromosome repeated DNA. Chromosoma. 1985; 92(3):225-33.
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O'Connell C, O'Brien S, Nash WG, Cohen M. ERV3, a full-length human endogenous provirus: chromosomal localization and evolutionary relationships. Virology. 1984 Oct 30; 138(2):225-35.
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Reeves RH, O'Brien SJ. Molecular genetic characterization of the RD-114 gene family of endogenous feline retroviral sequences. J Virol. 1984 Oct; 52(1):164-71.
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Anagnou NP, O'Brien SJ, Shimada T, Nash WG, Chen MJ, Nienhuis AW. Chromosomal organization of the human dihydrofolate reductase genes: dispersion, selective amplification, and a novel form of polymorphism. Proc Natl Acad Sci U S A. 1984 Aug; 81(16):5170-4.
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O'Brien SJ, Goldman D, Knight J, Moore HD, Wildt DE, Bush M, Montali RJ, Kleiman D. Giant panda paternity. Science. 1984 Mar 16; 223(4641):1127-8.
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Seigel LJ, Harper ME, Wong-Staal F, Gallo RC, Nash WG, O'Brien SJ. Gene for T-cell growth factor: location on human chromosome 4q and feline chromosome B1. Science. 1984 Jan 13; 223(4632):175-8.
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Bonner T, O'Brien SJ, Nash WG, Rapp UR, Morton CC, Leder P. The human homologs of the raf (mil) oncogene are located on human chromosomes 3 and 4. Science. 1984 Jan 6; 223(4631):71-4.
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Roderick TH, Lalley PA, Davisson MT, O'Brien SJ, Womack JE, Créau-Goldberg N, Echard G, Moore KL. Report of the Committee on Comparative Mapping. Cytogenet Cell Genet. 1984; 37(1-4):312-39.
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Wildt DE, Bush M, Howard JG, O'Brien SJ, Meltzer D, Van Dyk A, Ebedes H, Brand DJ. Unique seminal quality in the South African cheetah and a comparative evaluation in the domestic cat. Biol Reprod. 1983 Nov; 29(4):1019-25.
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O'Brien SJ, Berman EJ, Estes JD, Gardner MB. Murine retroviral restriction genes Fv-4 and Akvr-1 are alleles of a single locus. J Virol. 1983 Sep; 47(3):649-51.
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O'brien SJ, Wildt DE, Goldman D, Merril CR, Bush M. The cheetah is depauperate in genetic variation. Science. 1983 Jul 29; 221(4609):459-62.
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O'Brien SJ, Bonner TI, Cohen M, O'Connell C, Nash WG. Mapping of an endogenous retroviral sequence to human chromosome 18. Nature. 1983 May 5-11; 303(5912):74-7.
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Seibert K, Shafie SM, Triche TJ, Whang-Peng JJ, O'Brien SJ, Toney JH, Huff KK, Lippman ME. Clonal variation of MCF-7 breast cancer cells in vitro and in athymic nude mice. Cancer Res. 1983 May; 43(5):2223-39.
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O'Brien SJ, Nash WG, Goodwin JL, Lowy DR, Chang EH. Dispersion of the ras family of transforming genes to four different chromosomes in man. Nature. 1983 Apr 28; 302(5911):839-42.
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Nash WG, O'Brien SJ. Conserved regions of homologous G-banded chromosomes between orders in mammalian evolution: carnivores and primates. Proc Natl Acad Sci U S A. 1982 Nov; 79(21):6631-5.
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O'Brien SJ, Nash WG. Genetic mapping in mammals: chromosome map of domestic cat. Science. 1982 Apr 16; 216(4543):257-65.
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O'Brien SJ, Moore JL, Martin MA, Womack JE. Evidence for the horizontal acquisition of murine AKR virogenes by recent horizontal infection of the germ line. J Exp Med. 1982 Apr 1; 155(4):1120-23.
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O'Brien SJ, Nash WG, Winkler CA, Reeves RH. Genetic analysis in the domestic cat as an animal model for inborn errors, cancer and evolution. Prog Clin Biol Res. 1982; 94:67-90.
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Surti U, Szulman AE, O'Brien S. Complete (classic) hydatidiform mole with 46,XY karyotype of paternal origin. Hum Genet. 1979 Oct 1; 51(2):153-5.
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Engel LW, Young NA, Tralka TS, Lippman ME, O'Brien SJ, Joyce MJ. Establishment and characterization of three new continuous cell lines derived from human breast carcinomas. Cancer Res. 1978 Oct; 38(10):3352-64.
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Lemons RS, Nash WG, O'Brien SJ, Benveniste RE, Sherr CJ. A gene (Bevi) on human chromosome 6 is an integration site for baboon type C DNA provirus in human cells. Cell. 1978 Aug; 14(4):995-1005.
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O'Brien SJ, Simonson JM. Bvr-1, a restriction locus of a type C RNA virus in the feline cellular genome: pleiotropic restriction of endogenous BALB virus in cat X mouse somatic cell hybrids. J Exp Med. 1978 Jan 1; 147(1):219-32.
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Lemons RS, O'Brien SJ, Sherr CJ. A new genetic locus, Bevi, on human chromosome 6 which controls the replication of baboon type C virus in human cells. Cell. 1977 Sep; 12(1):251-62.
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O'Brien SJ, Boone CW. Expression of feline leukaemia virus antigens on cat lymphoma cells: kinetics of biosynthesis. J Gen Virol. 1977 Jun; 35(3):511-23.
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O'Brien SJ. Bvr-1, a restriction locus of a type C RNA virus in the feline cellular genome: identification, location, and phenotypic characterization in cat X mouse somatic cell hybrids. Proc Natl Acad Sci U S A. 1976 Dec; 73(12):4618-22.
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MacIntyre RJ, O'Brien SJ. Interacting gene-enzyme systems in Drosophila. Annu Rev Genet. 1976; 10:281-318.
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Diamond L, O'Brien S, Donaldson C, Shimizu Y. Growth stimulation of human diploid fibro-blasts by the tumor promoter, 12-0-tetradecanoly-phorbol-13-acetate. Int J Cancer. 1974 May 15; 13(5):721-30.
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O'Brien SJ, Gethmann RC. Segmental aneuploidy as a probe for structural genes in Drosophila: mitochondrial membrane enzymes. Genetics. 1973 Sep; 75(1):155-67.
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O'Brien SJ, Macintyre RJ. The -glycerophosphate in Drosophila melanogaster. II. Genetic aspects. Genetics. 1972 May; 71(1):127-38.
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