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Paolo Nunzio Ciccarese, Ph.D.

TitleAssistant Professor of Neurology
InstitutionMassachusetts General Hospital
DepartmentNeurology
AddressPartners Research Building
65 Landsdowne St
Cambridge MA 02139
Fax617/724-1480

 Bibliographic 
 selected publications
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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  1. Ciccarese P, Soiland-Reyes S, Belhajjame K, Gray AJ, Goble C, Clark T. PAV ontology: provenance, authoring and versioning. J Biomed Semantics. 2013; 4(1):37.
    View in: PubMed
  2. Comeau DC, Islamaj Dogan R, Ciccarese P, Cohen KB, Krallinger M, Leitner F, Lu Z, Peng Y, Rinaldi F, Torii M, Valencia A, Verspoor K, Wiegers TC, Wu CH, Wilbur WJ. BioC: a minimalist approach to interoperability for biomedical text processing. Database (Oxford). 2013; 2013:bat064.
    View in: PubMed
  3. Ciccarese P, Ocana M, Clark T. Open semantic annotation of scientific publications using DOMEO. J Biomed Semantics. 2012; 3 Suppl 1:S1.
    View in: PubMed
  4. Bandrowski AE, Cachat J, Li Y, Müller HM, Sternberg PW, Ciccarese P, Clark T, Marenco L, Wang R, Astakhov V, Grethe JS, Martone ME. A hybrid human and machine resource curation pipeline for the Neuroscience Information Framework. Database (Oxford). 2012; 2012:bas005.
    View in: PubMed
  5. Ciccarese P, Ocana M, Garcia Castro LJ, Das S, Clark T. An open annotation ontology for science on web 3.0. J Biomed Semantics. 2011; 2 Suppl 2:S4.
    View in: PubMed
  6. Ciccarese P, Wu E, Wong G, Ocana M, Kinoshita J, Ruttenberg A, Clark T. The SWAN biomedical discourse ontology. J Biomed Inform. 2008 Oct; 41(5):739-51.
    View in: PubMed
  7. Quaglini S, Ciccarese P. Models for guideline representation. Neurol Sci. 2006 Jun; 27 Suppl 3:S240-4.
    View in: PubMed
  8. Ciccarese P, Larizza C. A framework for temporal data processing and abstractions. AMIA Annu Symp Proc. 2006; 146-50.
    View in: PubMed
  9. Ciccarese P, Caffi E, Quaglini S, Stefanelli M. Architectures and tools for innovative Health Information Systems: the Guide Project. Int J Med Inform. 2005 Aug; 74(7-8):553-62.
    View in: PubMed
  10. Ciccarese P, Caffi E, Boiocchi L, Quaglini S, Stefanelli M. A guideline management system. Stud Health Technol Inform. 2004; 107(Pt 1):28-32.
    View in: PubMed
  11. Quaglini S, Ciccarese P, Micieli G, Cavallini A. Non-compliance with guidelines: motivations and consequences in a case study. Stud Health Technol Inform. 2004; 101:75-87.
    View in: PubMed
  12. Kumar A, Ciccarese P, Smith B, Piazza M. Context-based task ontologies for clinical guidelines. Stud Health Technol Inform. 2004; 102:81-94.
    View in: PubMed
  13. Kumar A, Quaglini S, Stefanelli M, Ciccarese P, Caffi E. Modular representation of the guideline text: an approach for maintaining and updating the content of medical education. Med Inform Internet Med. 2003 Jun; 28(2):99-115.
    View in: PubMed
  14. Kumar A, Ciccarese P, Quaglini S, Stefanelli M, Caffi E, Boiocchi L. Relating UMLS semantic types and task-based ontology to computer-interpretable clinical practice guidelines. Stud Health Technol Inform. 2003; 95:469-74.
    View in: PubMed
  15. Peleg M, Tu S, Bury J, Ciccarese P, Fox J, Greenes RA, Hall R, Johnson PD, Jones N, Kumar A, Miksch S, Quaglini S, Seyfang A, Shortliffe EH, Stefanelli M. Comparing computer-interpretable guideline models: a case-study approach. J Am Med Inform Assoc. 2003 Jan-Feb; 10(1):52-68.
    View in: PubMed
  16. Alexandre P, Ciccarese P, Breslin J, Clark T. ISWC 2009 SWASD (Workshop On Semantic Web Applications in Scientific Discourse). SWAN/SIOC: Aligning Scientific Discourse Representation and Social Semantics.
  17. Ciccarese P, Ocana M, Das S, Clark T. Proceedings Bio-ontologies 2010. AO: An Open Annotation Ontology for Science on the Web.
  18. Ciccarese P, Ocana M, Clark, T. Proceedings Bio-Ontologies 2011. DOMEO: a web-based tool for semantic annotation of online documents.
  19. Clark T, Ciccarese P. 2nd INCF Congress of Neuroinformatics. An agile model for semantic integration of biomedical web communities.
  20. Attanasio G, Ciccarese P, Wu E, Clark T, Pecis E. Proceedings of 3rd Tinnitus Research Initiative Meeting. Tinnitusbook: a proposal for an advanced scientific web community for tinnitus research.
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